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Analysis of Mutants Defective in the Cdk8 Module of Mediator Reveal Links between Metabolism and Biofilm Formation


Candida albicans is currently one of the most common causes of nosocomial infections, and causes diseases ranging from oral thrush to life-threatening systemic infections. C. albicans readily forms biofilms on implanted devices, such as catheters and dentures, and biofilms are associated with increased risk of systemic infections and resistance to antifungals. We previously showed that biofilm formation positively correlates with oxidative metabolism. Here, we show that respiration, wrinkled colony formation, biofilm formation, and resistance to the inhibitory effects of pyocyanin were increased when the Cdk8 module of Mediator, a co-regulator of transcription, was compromised. Cdk8 module mutants all exhibited differences in basal metabolism that were indicative of increased metabolic activity. Furthermore, using these strains, we showed a direct correlation between the inhibition of respiratory activity, in the absence of growth defects, and inhibition of biofilm formation, supporting a model in which C. albicans metabolism and morphology are linked. The human Cdk8 module is currently being investigated as a target for cancer chemotherapy, and thus an understanding of the consequences or potential benefits of inhibiting this module is required.


Vyšlo v časopise: Analysis of Mutants Defective in the Cdk8 Module of Mediator Reveal Links between Metabolism and Biofilm Formation. PLoS Genet 10(10): e32767. doi:10.1371/journal.pgen.1004567
Kategorie: Research Article
prolekare.web.journal.doi_sk: https://doi.org/10.1371/journal.pgen.1004567

Souhrn

Candida albicans is currently one of the most common causes of nosocomial infections, and causes diseases ranging from oral thrush to life-threatening systemic infections. C. albicans readily forms biofilms on implanted devices, such as catheters and dentures, and biofilms are associated with increased risk of systemic infections and resistance to antifungals. We previously showed that biofilm formation positively correlates with oxidative metabolism. Here, we show that respiration, wrinkled colony formation, biofilm formation, and resistance to the inhibitory effects of pyocyanin were increased when the Cdk8 module of Mediator, a co-regulator of transcription, was compromised. Cdk8 module mutants all exhibited differences in basal metabolism that were indicative of increased metabolic activity. Furthermore, using these strains, we showed a direct correlation between the inhibition of respiratory activity, in the absence of growth defects, and inhibition of biofilm formation, supporting a model in which C. albicans metabolism and morphology are linked. The human Cdk8 module is currently being investigated as a target for cancer chemotherapy, and thus an understanding of the consequences or potential benefits of inhibiting this module is required.


Zdroje

1. MartinMV, WilkinsonGR (1983) The oral yeast flora of 10-year-old schoolchildren. Sabouraudia 21: 129–135.

2. KimJ, SudberyP (2011) Candida albicans, a major human fungal pathogen. J Microbiol 49: 171–177.

3. PetersRB, BahnAN, BarensG (1966) Candida albicans in the oral cavities of diabetics. J Dent Res 45: 771–777.

4. BarlowAJ, ChattawayFW (1969) Observations on the carriage of Candida albicans in man. Br J Dermatol 81: 103–106.

5. OddsFC, WebsterCE, MayuranathanP, SimmonsPD (1988) Candida concentrations in the vagina and their association with signs and symptoms of vaginal candidosis. J Med Vet Mycol 26: 277–283.

6. SudberyPE (2011) Growth of Candida albicans hyphae. Nat Rev Microbiol 9: 737–748.

7. BonhommeJ, ChauvelM, GoyardS, RouxP, RossignolT, et al. (2011) Contribution of the glycolytic flux and hypoxia adaptation to efficient biofilm formation by Candida albicans. Mol Microbiol 80: 995–1013.

8. BaillieGS, DouglasLJ (1999) Role of dimorphism in the development of Candida albicans biofilms. J Med Microbiol 48: 671–679.

9. HawserSP, DouglasLJ (1994) Biofilm formation by Candida species on the surface of catheter materials in vitro. Infect Immun 62: 915–921.

10. DonlanRM (2001) Biofilm formation: a clinically relevant microbiological process. Clin Infect Dis 33: 1387–1392.

11. DonlanRM (2002) Biofilms: microbial life on surfaces. Emerg Infect Dis 8: 881–890.

12. DonlanRM (2001) Biofilms and device-associated infections. Emerg Infect Dis 7: 277–281.

13. KhardoriN, YassienM (1995) Biofilms in device-related infections. J Ind Microbiol 15: 141–147.

14. LewisRE, KontoyiannisDP, DarouicheRO, Raad, II, PrinceRA (2002) Antifungal activity of amphotericin B, fluconazole, and voriconazole in an in vitro model of Candida catheter-related bloodstream infection. Antimicrob Agents Chemother 46: 3499–3505.

15. RamageG, Vande WalleK, WickesBL, Lopez-RibotJL (2001) Standardized method for in vitro antifungal susceptibility testing of Candida albicans biofilms. Antimicrob Agents Chemother 45: 2475–2479.

16. RamageG, VandeWalleK, BachmannSP, WickesBL, Lopez-RibotJL (2002) In vitro pharmacodynamic properties of three antifungal agents against preformed Candida albicans biofilms determined by time-kill studies. Antimicrob Agents Chemother 46: 3634–3636.

17. RamageG, WickesBL, Lopez-RibotJL (2001) Biofilms of Candida albicans and their associated resistance to antifungal agents. Am Clin Lab 20: 42–44.

18. HawserSP, DouglasLJ (1995) Resistance of Candida albicans biofilms to antifungal agents in vitro. Antimicrob Agents Chemother 39: 2128–2131.

19. SlutskyB, BuffoJ, SollDR (1985) High-frequency switching of colony morphology in Candida albicans. Science 230: 666–669.

20. MartinezJP, GilML, CasanovaM, Lopez-RibotJL, Garcia De LomasJ, et al. (1990) Wall mannoproteins in cells from colonial phenotypic variants of Candida albicans. J Gen Microbiol 136: 2421–2432.

21. PestiM, NovakEK, FerenczyL, SvobodaA (1981) Freeze fracture electron microscopical investigation of Candida albicans cells sensitive and resistant to nystatin. Sabouraudia 19: 17–26.

22. PestiM, SipiczkiM, PinterY (1999) Scanning electron microscopy characterisation of colonies of Candida albicans morphological mutants. J Med Microbiol 48: 167–172.

23. RottmannM, DieterS, BrunnerH, RuppS (2003) A screen in Saccharomyces cerevisiae identified CaMCM1, an essential gene in Candida albicans crucial for morphogenesis. Mol Microbiol 47: 943–959.

24. DietrichLE, OkegbeC, Price-WhelanA, SakhtahH, HunterRC, et al. (2013) Bacterial community morphogenesis is intimately linked to the intracellular redox state. J Bacteriol 195: 1371–1380.

25. MoralesDK, GrahlN, OkegbeC, DietrichLE, JacobsNJ, et al. (2013) Control of Candida albicans metabolism and biofilm formation by Pseudomonas aeruginosa phenazines. MBio 4: e00526–00512.

26. SetiadiER, DoedtT, CottierF, NoffzC, ErnstJF (2006) Transcriptional response of Candida albicans to hypoxia: linkage of oxygen sensing and Efg1p-regulatory networks. J Mol Biol 361: 399–411.

27. RossignolT, DingC, GuidaA, d'EnfertC, HigginsDG, et al. (2009) Correlation between biofilm formation and the hypoxic response in Candida parapsilosis. Eukaryot Cell 8: 550–559.

28. BiswasSK, ChaffinWL (2005) Anaerobic growth of Candida albicans does not support biofilm formation under similar conditions used for aerobic biofilm. Curr Microbiol 51: 100–104.

29. TheinZM, SamaranayakeYH, SamaranayakeLP (2007) In vitro biofilm formation of Candida albicans and non-albicans Candida species under dynamic and anaerobic conditions. Arch Oral Biol 52: 761–767.

30. WatanabeT, OgasawaraA, MikamiT, MatsumotoT (2006) Hyphal formation of Candida albicans is controlled by electron transfer system. Biochem Biophys Res Commun 348: 206–211.

31. BoubeM, JouliaL, CribbsDL, BourbonHM (2002) Evidence for a mediator of RNA polymerase II transcriptional regulation conserved from yeast to man. Cell 110: 143–151.

32. BjorklundS, GustafssonCM (2005) The yeast Mediator complex and its regulation. Trends Biochem Sci 30: 240–244.

33. TsaiKL, Tomomori-SatoC, SatoS, ConawayRC, ConawayJW, et al. (2014) Subunit Architecture and Functional Modular Rearrangements of the Transcriptional Mediator Complex. Cell 157: 1430–1444.

34. BorggrefeT, DavisR, Erdjument-BromageH, TempstP, KornbergRD (2002) A complex of the Srb8, -9, -10, and -11 transcriptional regulatory proteins from yeast. J Biol Chem 277: 44202–44207.

35. ConawayRC, ConawayJW (2011) Function and regulation of the Mediator complex. Curr Opin Genet Dev 21: 225–230.

36. KuchinS, CarlsonM (1998) Functional relationships of Srb10–Srb11 kinase, carboxy-terminal domain kinase CTDK-I, and transcriptional corepressor Ssn6-Tup1. Mol Cell Biol 18: 1163–1171.

37. LarschanE, WinstonF (2005) The Saccharomyces cerevisiae Srb8-Srb11 complex functions with the SAGA complex during Gal4-activated transcription. Mol Cell Biol 25: 114–123.

38. van de PeppelJ, KettelarijN, van BakelH, KockelkornTT, van LeenenD, et al. (2005) Mediator expression profiling epistasis reveals a signal transduction pathway with antagonistic submodules and highly specific downstream targets. Mol Cell 19: 511–522.

39. ChangYW, HowardSC, HermanPK (2004) The Ras/PKA signaling pathway directly targets the Srb9 protein, a component of the general RNA polymerase II transcription apparatus. Mol Cell 15: 107–116.

40. ChangYW, HowardSC, BudovskayaYV, RineJ, HermanPK (2001) The rye mutants identify a role for Ssn/Srb proteins of the RNA polymerase II holoenzyme during stationary phase entry in Saccharomyces cerevisiae. Genetics 157: 17–26.

41. SamuelsenCO, BaraznenokV, KhorosjutinaO, SpahrH, KieselbachT, et al. (2003) TRAP230/ARC240 and TRAP240/ARC250 Mediator subunits are functionally conserved through evolution. Proc Natl Acad Sci U S A 100: 6422–6427.

42. NobleSM, FrenchS, KohnLA, ChenV, JohnsonAD (2010) Systematic screens of a Candida albicans homozygous deletion library decouple morphogenetic switching and pathogenicity. Nat Genet 42: 590–598.

43. DavisDA, BrunoVM, LozaL, FillerSG, MitchellAP (2002) Candida albicans Mds3p, a conserved regulator of pH responses and virulence identified through insertional mutagenesis. Genetics 162: 1573–1581.

44. NobileCJ, AndesDR, NettJE, SmithFJ, YueF, et al. (2006) Critical role of Bcr1-dependent adhesins in C. albicans biofilm formation in vitro and in vivo. PLoS Pathog 2: e63.

45. NobileCJ, MitchellAP (2009) Large-scale gene disruption using the UAU1 cassette. Methods Mol Biol 499: 175–194.

46. BlankenshipJR, FanningS, HamakerJJ, MitchellAP (2010) An extensive circuitry for cell wall regulation in Candida albicans. PLoS Pathog 6: e1000752.

47. KnueselMT, MeyerKD, BerneckyC, TaatjesDJ (2009) The human CDK8 subcomplex is a molecular switch that controls Mediator coactivator function. Genes Dev 23: 439–451.

48. TsaiKL, SatoS, Tomomori-SatoC, ConawayRC, ConawayJW, et al. (2013) A conserved Mediator-CDK8 kinase module association regulates Mediator-RNA polymerase II interaction. Nat Struct Mol Biol 20: 611–619.

49. KornbergRD (2005) Mediator and the mechanism of transcriptional activation. Trends Biochem Sci 30: 235–239.

50. LiaoSM, ZhangJ, JefferyDA, KoleskeAJ, ThompsonCM, et al. (1995) A kinase-cyclin pair in the RNA polymerase II holoenzyme. Nature 374: 193–196.

51. HengartnerCJ, MyerVE, LiaoSM, WilsonCJ, KohSS, et al. (1998) Temporal regulation of RNA polymerase II by Srb10 and Kin28 cyclin-dependent kinases. Mol Cell 2: 43–53.

52. CarlsonM (1997) Genetics of transcriptional regulation in yeast: connections to the RNA polymerase II CTD. Annu Rev Cell Dev Biol 13: 1–23.

53. RaithathaS, SuTC, LourencoP, GotoS, SadowskiI (2012) Cdk8 regulates stability of the transcription factor Phd1 to control pseudohyphal differentiation of Saccharomyces cerevisiae. Mol Cell Biol 32: 664–674.

54. NelsonC, GotoS, LundK, HungW, SadowskiI (2003) Srb10/Cdk8 regulates yeast filamentous growth by phosphorylating the transcription factor Ste12. Nature 421: 187–190.

55. HirstM, KoborMS, KuriakoseN, GreenblattJ, SadowskiI (1999) GAL4 is regulated by the RNA polymerase II holoenzyme-associated cyclin-dependent protein kinase SRB10/CDK8. Mol Cell 3: 673–678.

56. ChenC, NobleSM (2012) Post-transcriptional regulation of the Sef1 transcription factor controls the virulence of Candida albicans in its mammalian host. PLoS Pathog 8: e1002956.

57. HallbergM, PolozkovGV, HuGZ, BeveJ, GustafssonCM, et al. (2004) Site-specific Srb10-dependent phosphorylation of the yeast Mediator subunit Med2 regulates gene expression from the 2-microm plasmid. Proc Natl Acad Sci U S A 101: 3370–3375.

58. ChiY, HuddlestonMJ, ZhangX, YoungRA, AnnanRS, et al. (2001) Negative regulation of Gcn4 and Msn2 transcription factors by Srb10 cyclin-dependent kinase. Genes Dev 15: 1078–1092.

59. CohenTJ, LeeK, RutkowskiLH, StrichR (2003) Ask10p mediates the oxidative stress-induced destruction of the Saccharomyces cerevisiae C-type cyclin Ume3p/Srb11p. Eukaryot Cell 2: 962–970.

60. MyersLC, KornbergRD (2000) Mediator of transcriptional regulation. Annu Rev Biochem 69: 729–749.

61. GreenSR, JohnsonAD (2004) Promoter-dependent roles for the Srb10 cyclin-dependent kinase and the Hda1 deacetylase in Tup1-mediated repression in Saccharomyces cerevisiae. Mol Biol Cell 15: 4191–4202.

62. BraunBR, KadoshD, JohnsonAD (2001) NRG1, a repressor of filamentous growth in C. albicans, is down-regulated during filament induction. EMBO J 20: 4753–4761.

63. MuradAM, LengP, StraffonM, WishartJ, MacaskillS, et al. (2001) NRG1 represses yeast-hypha morphogenesis and hypha-specific gene expression in Candida albicans. EMBO J 20: 4742–4752.

64. HengartnerCJ, ThompsonCM, ZhangJ, ChaoDM, LiaoSM, et al. (1995) Association of an activator with an RNA polymerase II holoenzyme. Genes Dev 9: 897–910.

65. Lee, ChatterjeeS, StruhlK (2000) Genetic Analysis of the Role of Pol II Holoenzyme Components in Repression by the Cyc8-Tup1 Corepressor in Yeast. Genetics 155: 1535–1542.

66. VylkovaS, CarmanAJ, DanhofHA, ColletteJR, ZhouH, et al. (2011) The fungal pathogen Candida albicans autoinduces hyphal morphogenesis by raising extracellular pH. MBio 2: e00055–00011.

67. BuffoJ, HermanMA, SollDR (1984) A characterization of pH-regulated dimorphism in Candida albicans. Mycopathologia 85: 21–30.

68. Garcia-SanchezS, MavorAL, RussellCL, ArgimonS, DennisonP, et al. (2005) Global roles of Ssn6 in Tup1- and Nrg1-dependent gene regulation in the fungal pathogen, Candida albicans. Mol Biol Cell 16: 2913–2925.

69. NobileCJ, FoxEP, NettJE, SorrellsTR, MitrovichQM, et al. (2012) A recently evolved transcriptional network controls biofilm development in Candida albicans. Cell 148: 126–138.

70. ReppKK, MenorSA, PettitRK (2007) Microplate Alamar blue assay for susceptibility testing of Candida albicans biofilms. Med Mycol 45: 603–607.

71. RampersadSN (2012) Multiple applications of Alamar Blue as an indicator of metabolic function and cellular health in cell viability bioassays. Sensors (Basel) 12: 12347–12360.

72. Grahl N, Kern S, Newman D, Hogan D (2013) The Yin and Yang of Phenazine Physiology. In: Chincholkar S, Thomashow L, editors. Microbial Phenazines: Springer Berlin Heidelberg. pp. 43–69.

73. KasoziDM, GromerS, AdlerH, ZocherK, RahlfsS, et al. (2011) The bacterial redox signaller pyocyanin as an antiplasmodial agent: comparisons with its thioanalog methylene blue. Redox Rep 16: 154–165.

74. SchirmerRH, AdlerH, PickhardtM, MandelkowE (2011) “Lest we forget you–methylene blue…”. Neurobiol Aging 32: 2325 e2327–2316.

75. Walter-SackI, RengelshausenJ, OberwittlerH, BurhenneJ, MuellerO, et al. (2009) High absolute bioavailability of methylene blue given as an aqueous oral formulation. Eur J Clin Pharmacol 65: 179–189.

76. RuyF, VercesiAE, KowaltowskiAJ (2006) Inhibition of specific electron transport pathways leads to oxidative stress and decreased Candida albicans proliferation. J Bioenerg Biomembr 38: 129–135.

77. O'MalleyYQ, AbdallaMY, McCormickML, ReszkaKJ, DenningGM, et al. (2003) Subcellular localization of Pseudomonas pyocyanin cytotoxicity in human lung epithelial cells. Am J Physiol Lung Cell Mol Physiol 284: L420–430.

78. YeaterKM, ChandraJ, ChengG, MukherjeePK, ZhaoX, et al. (2007) Temporal analysis of Candida albicans gene expression during biofilm development. Microbiology 153: 2373–2385.

79. SellamA, Al-NiemiT, McInnerneyK, BrumfieldS, NantelA, et al. (2009) A Candida albicans early stage biofilm detachment event in rich medium. BMC Microbiol 9: 25.

80. MurilloLA, NewportG, LanCY, HabelitzS, DunganJ, et al. (2005) Genome-wide transcription profiling of the early phase of biofilm formation by Candida albicans. Eukaryot Cell 4: 1562–1573.

81. LindsayAK, DeveauA, PiispanenAE, HoganDA (2012) Farnesol and cyclic AMP signaling effects on the hypha-to-yeast transition in Candida albicans. Eukaryot Cell 11: 1219–1225.

82. Davis-HannaA, PiispanenAE, StatevaLI, HoganDA (2008) Farnesol and dodecanol effects on the Candida albicans Ras1-cAMP signalling pathway and the regulation of morphogenesis. Mol Microbiol 67: 47–62.

83. HarcusD, NantelA, MarcilA, RigbyT, WhitewayM (2004) Transcription profiling of cyclic AMP signaling in Candida albicans. Mol Biol Cell 15: 4490–4499.

84. EnjalbertB, NantelA, WhitewayM (2003) Stress-induced gene expression in Candida albicans: absence of a general stress response. Mol Biol Cell 14: 1460–1467.

85. NemetJ, JelicicB, RubeljI, SoptaM (2014) The two faces of Cdk8, a positive/negative regulator of transcription. Biochimie 97: 22–27.

86. NunezL, Gonzalez-SisoMI, BecerraM, CerdanME (2007) Functional motifs outside the kinase domain of yeast Srb10p. Their role in transcriptional regulation and protein-interactions with Tup1p and Srb11p. Biochim Biophys Acta 1774: 1227–1235.

87. GancedoJM (2001) Control of pseudohyphae formation in Saccharomyces cerevisiae. FEMS Microbiol Rev 25: 107–123.

88. SongW, CarlsonM (1998) Srb/mediator proteins interact functionally and physically with transcriptional repressor Sfl1. EMBO J 17: 5757–5765.

89. HelmerhorstEJ, MurphyMP, TroxlerRF, OppenheimFG (2002) Characterization of the mitochondrial respiratory pathways in Candida albicans. Biochim Biophys Acta 1556: 73–80.

90. TangL, LiuX, ClarkeND (2006) Inferring direct regulatory targets from expression and genome location analyses: a comparison of transcription factor deletion and overexpression. BMC Genomics 7: 215.

91. KohlhawGB (2003) Leucine biosynthesis in fungi: entering metabolism through the back door. Microbiol Mol Biol Rev 67: 1–15 table of contents.

92. FinkelJS, XuW, HuangD, HillEM, DesaiJV, et al. (2012) Portrait of Candida albicans adherence regulators. PLoS Pathog 8: e1002525.

93. NobileCJ, SchneiderHA, NettJE, SheppardDC, FillerSG, et al. (2008) Complementary adhesin function in C. albicans biofilm formation. Curr Biol 18: 1017–1024.

94. UwamahoroN, QuY, JelicicB, LoTL, BeaurepaireC, et al. (2012) The functions of Mediator in Candida albicans support a role in shaping species-specific gene expression. PLoS Genet 8: e1002613.

95. AskewC, SellamA, EppE, HoguesH, MullickA, et al. (2009) Transcriptional regulation of carbohydrate metabolism in the human pathogen Candida albicans. PLoS Pathog 5: e1000612.

96. AyerA, SanwaldJ, PillayBA, MeyerAJ, PerroneGG, et al. (2013) Distinct redox regulation in sub-cellular compartments in response to various stress conditions in Saccharomyces cerevisiae. PLoS One 8: e65240.

97. SchaferFQ, BuettnerGR (2001) Redox environment of the cell as viewed through the redox state of the glutathione disulfide/glutathione couple. Free Radic Biol Med 30: 1191–1212.

98. LiXY, LuoQF, WeiCK, LiDF, FangL (2014) siRNA-mediated silencing of CDK8 inhibits proliferation and growth in breast cancer cells. Int J Clin Exp Pathol 7: 92–100.

99. FiresteinR, BassAJ, KimSY, DunnIF, SilverSJ, et al. (2008) CDK8 is a colorectal cancer oncogene that regulates beta-catenin activity. Nature 455: 547–551.

100. PorterDC, FarmakiE, AltiliaS, SchoolsGP, WestDK, et al. (2012) Cyclin-dependent kinase 8 mediates chemotherapy-induced tumor-promoting paracrine activities. Proc Natl Acad Sci U S A 109: 13799–13804.

101. ZhangA, PetrovKO, HyunER, LiuZ, GerberSA, et al. (2012) The Tlo proteins are stoichiometric components of Candida albicans mediator anchored via the Med3 subunit. Eukaryot Cell 11: 874–884.

102. FanJ, ChaturvediV, ShenSH (2002) Identification and phylogenetic analysis of a glucose transporter gene family from the human pathogenic yeast Candida albicans. J Mol Evol 55: 336–346.

103. BrownV, SextonJA, JohnstonM (2006) A glucose sensor in Candida albicans. Eukaryot Cell 5: 1726–1737.

104. DesaiJV, BrunoVM, GangulyS, StamperRJ, MitchellKF, et al. (2013) Regulatory role of glycerol in Candida albicans biofilm formation. MBio 4: e00637–00612.

105. RichardML, NobileCJ, BrunoVM, MitchellAP (2005) Candida albicans biofilm-defective mutants. Eukaryot Cell 4: 1493–1502.

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