-
Články
- Časopisy
- Kurzy
- Témy
- Kongresy
- Videa
- Podcasty
Dimensions of Horizontal Gene Transfer in Eukaryotic Microbial Pathogens
article has not abstract
Vyšlo v časopise: Dimensions of Horizontal Gene Transfer in Eukaryotic Microbial Pathogens. PLoS Pathog 11(10): e32767. doi:10.1371/journal.ppat.1005156
Kategorie: Pearls
prolekare.web.journal.doi_sk: https://doi.org/10.1371/journal.ppat.1005156Souhrn
article has not abstract
Zdroje
1. Thomas CM, Nielsen KM (2005) Mechanisms of, and barriers to, horizontal gene transfer between bacteria. Nat Rev Micro 3 : 711–721.
2. Baquero F (2004) From pieces to patterns: evolutionary engineering in bacterial pathogens. Nat Rev Microbiol 2 : 510–518. 15152207
3. Smillie CS, Smith MB, Friedman J, Cordero OX, David LA, et al. (2011) Ecology drives a global network of gene exchange connecting the human microbiome. Nature 480 : 241–244. doi: 10.1038/nature10571 22037308
4. Barlow M (2009) What antimicrobial resistance has taught us about horizontal gene transfer. Methods Mol Biol 532 : 397–411. doi: 10.1007/978-1-60327-853-9_23 19271198
5. Kroken S, Glass NL, Taylor JW, Yoder OC, Turgeon BG (2003) Phylogenomic analysis of type I polyketide synthase genes in pathogenic and saprobic ascomycetes. Proc Natl Acad Sci USA 100 : 15670–15675. 14676319
6. Soanes D, Richards TA (2014) Horizontal gene transfer in eukaryotic plant pathogens. Annual Review of Phytopathology 52 : 583–614. doi: 10.1146/annurev-phyto-102313-050127 25090479
7. Zhaxybayeva O, Doolittle WF (2011) Lateral gene transfer. Current Biology 21: pR242–R246.
8. Heath TA, Hedtke SM, Hillis DM (2008) Taxon sampling and the accuracy of phylogenetic analyses. J Syst Evol 46 : 239–257.
9. James TY, Pelin A, Bonen L, Ahrendt S, Sain D, et al. (2013) Shared signatures of parasitism and phylogenomics unite Cryptomycota and microsporidia. Curr Biol 23 : 1548–1553. doi: 10.1016/j.cub.2013.06.057 23932404
10. Lin K, Limpens E, Zhang Z, Ivanov S, Saunders DGO, et al. (2014) Single nucleus genome sequencing reveals high similarity among nuclei of an endomycorrhizal fungus. PLoS Genet 10: e1004078. doi: 10.1371/journal.pgen.1004078 24415955
11. Sun G, Yang Z, Kosch T, Summers K, Huang J (2011) Evidence for acquisition of virulence effectors in pathogenic chytrids. BMC Evolutionary Biology 11 : 195. doi: 10.1186/1471-2148-11-195 21740557
12. Campbell MA, Staats M, van Kan JA, Rokas A, Slot JC (2013) Repeated loss of an anciently horizontally transferred gene cluster in Botrytis. Mycologia 105 : 1126–1134. doi: 10.3852/12-390 23921237
13. Grigoriev IV, Nikitin R, Haridas S, Kuo A, Ohm R, et al. (2014) MycoCosm portal: gearing up for 1000 fungal genomes. Nucleic Acids Research 42: D699–D704. doi: 10.1093/nar/gkt1183 24297253
14. Jain R, Rivera MC, Lake JA (1999) Horizontal gene transfer among genomes: the complexity hypothesis. Proc Natl Acad Sci USA 96 : 3801–3806. 10097118
15. Pal C, Papp B, Lercher MJ (2005) Adaptive evolution of bacterial metabolic networks by horizontal gene transfer. Nat Genet 37 : 1372–1375. 16311593
16. Cohen O, Gophna U, Pupko T (2011) The complexity hypothesis revisited: connectivity rather than function constitutes a barrier to horizontal gene transfer. Mol Biol Evol 28 : 1481–1489. doi: 10.1093/molbev/msq333 21149642
17. Friesen TL, Stukenbrock EH, Liu Z, Meinhardt S, Ling H, et al. (2006) Emergence of a new disease as a result of interspecific virulence gene transfer. Nat Genet 38 : 953–956. 16832356
18. Richards TA, Soanes DM, Jones MDM, Vasieva O, Leonard G, et al. (2011) Horizontal gene transfer facilitated the evolution of plant parasitic mechanisms in the oomycetes. Proc Natl Acad Sci USA 108 : 15258–15263. doi: 10.1073/pnas.1105100108 21878562
19. Klosterman SJ, Subbarao KV, Kang S, Veronese P, Gold SE, et al. (2011) Comparative genomics yields insights into niche adaptation of plant vascular wilt pathogens. PLoS Pathog 7: e1002137. doi: 10.1371/journal.ppat.1002137 21829347
20. Tsaousis AD, Ollagnier de Choudens S, Gentekaki E, Long S, Gaston D, et al. (2012) Evolution of Fe/S cluster biogenesis in the anaerobic parasite Blastocystis. Proc Natl Acad Sci USA 109 : 10426–10431. doi: 10.1073/pnas.1116067109 22699510
21. Greene GH, McGary KL, Rokas A, Slot JC (2014) Ecology drives the distribution of specialized tyrosine metabolism modules in fungi. Genome Biol Evol 6 : 121–132. doi: 10.1093/gbe/evt208 24391152
22. Khaldi N, Wolfe KH (2011) Evolutionary origins of the fumonisin secondary metabolite gene cluster in Fusarium verticillioides and Aspergillus niger. International Journal of Evolutionary Biology 2011. Epub 2011 May 23.
23. Patron NJ, Waller RF, Cozijnsen AJ, Straney DC, Gardiner DM, et al. (2007) Origin and distribution of epipolythiodioxopiperazine (ETP) gene clusters in filamentous ascomycetes. BMC Evol Biol 7 : 174. 17897469
24. Elmore MH, McGary KL, Wisecaver JH, Slot JC, Geiser DM, et al. (2015) Clustering of two genes putatively involved in cyanate detoxification evolved recently and independently in multiple fungal lineages. Genome Biol Evol 7 : 789–800. doi: 10.1093/gbe/evv025 25663439
25. Carlton JM, Hirt RP, Silva JC, Delcher AL, Schatz M, et al. (2007) Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Science 315 : 207–212. 17218520
26. Strese A, Backlund A, Alsmark C (2014) A recently transferred cluster of bacterial genes in Trichomonas vaginalis-lateral gene transfer and the fate of acquired genes. BMC Evol Biol 14 : 119. doi: 10.1186/1471-2148-14-119 24898731
27. Whitaker JW, McConkey GA, Westhead DR (2009) The transferome of metabolic genes explored: analysis of the horizontal transfer of enzyme encoding genes in unicellular eukaryotes. Genome Biology 10:R36. doi: 10.1186/gb-2009-10-4-r36 19368726
28. Wisecaver JH, Slot JC, Rokas A (2014) The evolution of fungal metabolic pathways. PLoS Genet 10: e1004816. doi: 10.1371/journal.pgen.1004816 25474404
29. Sun B-F, Xiao J-H, He S, Liu L, Murphy RW, et al. (2013) Multiple interkingdom horizontal gene transfers in Pyrenophora and closely related species and their contributions to phytopathogenic lifestyles. PLoS ONE 8: e60029. doi: 10.1371/journal.pone.0060029 23555871
30. Richards TA, Talbot NJ (2013) Horizontal gene transfer in osmotrophs: playing with public goods. Nat Rev Micro 11 : 720–727.
31. Savory F, Leonard G, Richards TA (2015) The role of horizontal gene transfer in the evolution of the oomycetes. PLoS Pathog 11: e1004805. doi: 10.1371/journal.ppat.1004805 26020232
32. Zhao H, Xu C, Lu H-L, Chen X, St. Leger RJ, et al. (2014) Host-to-pathogen gene transfer facilitated infection of insects by a pathogenic fungus. PLoS Pathog 10: e1004009. doi: 10.1371/journal.ppat.1004009 24722668
33. Pombert J-F, Haag KL, Beidas S, Ebert D, Keeling PJ (2015) The Ordospora colligata genome: evolution of extreme reduction in microsporidia and host-to-parasite horizontal gene transfer. mBio 6: e02400–14 doi: 10.1128/mBio.02400-14 25587016
34. Gardiner DM, McDonald MC, Covarelli L, Solomon PS, Rusu AG, et al. (2012) Comparative pathogenomics reveals horizontally acquired novel virulence genes in fungi infecting cereal hosts. PLoS Pathog 8: e1002952. doi: 10.1371/journal.ppat.1002952 23028337
35. Slot JC, Hibbett DS (2007) Horizontal transfer of a nitrate assimilation gene cluster and ecological transitions in fungi: a phylogenetic study. PLoS ONE 2: e1097. 17971860
36. Slot JC, Rokas A (2010) Multiple GAL pathway gene clusters evolved independently and by different mechanisms in fungi. Proc Natl Acad Sci USA 107 : 10136–10141. doi: 10.1073/pnas.0914418107 20479238
37. Selman M, Pombert JF, Solter L, Farinelli L, Weiss LM, et al. (2011) Acquisition of an animal gene by microsporidian intracellular parasites. Curr Biol 21: R576–577. doi: 10.1016/j.cub.2011.06.017 21820617
38. Armijos Jaramillo VD, Vargas WA, Sukno SA, Thon MR (2013) Horizontal transfer of a subtilisin gene from plants into an ancestor of the plant pathogenic fungal genus Colletotrichum. PLoS ONE 8: e59078. doi: 10.1371/journal.pone.0059078 23554975
39. Ford Doolittle W (1998) You are what you eat: a gene transfer ratchet could account for bacterial genes in eukaryotic nuclear genomes. Trends in Genetics 14 : 307–311. 9724962
40. Walther BA, Ewald PW (2004) Pathogen survival in the external environment and the evolution of virulence. Biol Rev Camb Philos Soc 79 : 849–869. 15682873
41. Parmesan C, Yohe G (2003) A globally coherent fingerprint of climate change impacts across natural systems. Nature 421 : 37–42. 12511946
Štítky
Hygiena a epidemiológia Infekčné lekárstvo Laboratórium
Článek TRIM21 Promotes cGAS and RIG-I Sensing of Viral Genomes during Infection by Antibody-Opsonized VirusČlánek Effector OspB Activates mTORC1 in a Manner That Depends on IQGAP1 and Promotes Cell ProliferationČlánek Fundamental Roles of the Golgi-Associated Aspartyl Protease, ASP5, at the Host-Parasite InterfaceČlánek Modulation of the Surface Proteome through Multiple Ubiquitylation Pathways in African Trypanosomes
Článok vyšiel v časopisePLOS Pathogens
Najčítanejšie tento týždeň
2015 Číslo 10- Očkování proti virové hemoragické horečce Ebola experimentální vakcínou rVSVDG-ZEBOV-GP
- Parazitičtí červi v terapii Crohnovy choroby a dalších zánětlivých autoimunitních onemocnění
- Koronavirus hýbe světem: Víte jak se chránit a jak postupovat v případě podezření?
-
Všetky články tohto čísla
- Expression of Concern: Misregulation of Underlies the Developmental Abnormalities Caused by Three Distinct Viral Silencing Suppressors in Arabidopsis
- Preparing for the Next Epidemic with Basic Virology
- Effectively Communicating the Uncertainties Surrounding Ebola Virus Transmission
- Translating Basic Research into Clinical Applications: Malaria Research at an NIH Lab
- A Gut Odyssey: The Impact of the Microbiota on Spore Formation and Germination
- Papillomavirus E6 Oncoproteins Take Common Structural Approaches to Solve Different Biological Problems
- Chronobiomics: The Biological Clock as a New Principle in Host–Microbial Interactions
- Dimensions of Horizontal Gene Transfer in Eukaryotic Microbial Pathogens
- Addressing the Complications of Ebola and Other Viral Hemorrhagic Fever Infections: Using Insights from Bacterial and Fungal Sepsis
- Time for Chocolate: Current Understanding and New Perspectives on Cacao Witches’ Broom Disease Research
- Ganglioside and Non-ganglioside Mediated Host Responses to the Mouse Polyomavirus
- Crosslinking of a Peritrophic Matrix Protein Protects Gut Epithelia from Bacterial Exotoxins
- Structure Elucidation of Coxsackievirus A16 in Complex with GPP3 Informs a Systematic Review of Highly Potent Capsid Binders to Enteroviruses
- CD39 Expression Identifies Terminally Exhausted CD8 T Cells
- Abiotic Stresses Antagonize the Rice Defence Pathway through the Tyrosine-Dephosphorylation of OsMPK6
- Dissociation of Tissue Destruction and Bacterial Expansion during Bubonic Plague
- Interferon-γ: The Jekyll and Hyde of Malaria
- CCR2 Inflammatory Dendritic Cells and Translocation of Antigen by Type III Secretion Are Required for the Exceptionally Large CD8 T Cell Response to the Protective YopE Epitope during Infection
- A New Glycan-Dependent CD4-Binding Site Neutralizing Antibody Exerts Pressure on HIV-1
- The Suramin Derivative NF449 Interacts with the 5-fold Vertex of the Enterovirus A71 Capsid to Prevent Virus Attachment to PSGL-1 and Heparan Sulfate
- Trans-generational Immune Priming Protects the Eggs Only against Gram-Positive Bacteria in the Mealworm Beetle
- Peripheral Vγ9Vδ2 T Cells Are a Novel Reservoir of Latent HIV Infection
- Respiratory Syncytial Virus Disease Is Mediated by Age-Variable IL-33
- TRIM21 Promotes cGAS and RIG-I Sensing of Viral Genomes during Infection by Antibody-Opsonized Virus
- Modeling the Effects of Vorinostat Reveals both Transient and Delayed HIV Transcriptional Activation and Minimal Killing of Latently Infected Cells
- Identification of a Novel Lipoprotein Regulator of Spore Germination
- Calcium Regulation of Hemorrhagic Fever Virus Budding: Mechanistic Implications for Host-Oriented Therapeutic Intervention
- Antigen-Specific Th17 Cells Are Primed by Distinct and Complementary Dendritic Cell Subsets in Oropharyngeal Candidiasis
- Comparative Life Cycle Transcriptomics Revises Genome Annotation and Links a Chromosome Duplication with Parasitism of Vertebrates
- The Autophagy Receptor TAX1BP1 and the Molecular Motor Myosin VI Are Required for Clearance of Salmonella Typhimurium by Autophagy
- Carcinogenic Parasite Secretes Growth Factor That Accelerates Wound Healing and Potentially Promotes Neoplasia
- Effector OspB Activates mTORC1 in a Manner That Depends on IQGAP1 and Promotes Cell Proliferation
- Dengue Virus Infection of Requires a Putative Cysteine Rich Venom Protein
- Distinct Viral and Mutational Spectrum of Endemic Burkitt Lymphoma
- Fundamental Roles of the Golgi-Associated Aspartyl Protease, ASP5, at the Host-Parasite Interface
- Phenotypic and Functional Alterations in Circulating Memory CD8 T Cells with Time after Primary Infection
- Systematic Identification of Cyclic-di-GMP Binding Proteins in Reveals a Novel Class of Cyclic-di-GMP-Binding ATPases Associated with Type II Secretion Systems
- Influenza Transmission in the Mother-Infant Dyad Leads to Severe Disease, Mammary Gland Infection, and Pathogenesis by Regulating Host Responses
- Myeloid Cell Arg1 Inhibits Control of Arthritogenic Alphavirus Infection by Suppressing Antiviral T Cells
- The White-Nose Syndrome Transcriptome: Activation of Anti-fungal Host Responses in Wing Tissue of Hibernating Little Brown Myotis
- Influenza Virus Reassortment Is Enhanced by Semi-infectious Particles but Can Be Suppressed by Defective Interfering Particles
- Identification of the Mechanisms Causing Reversion to Virulence in an Attenuated SARS-CoV for the Design of a Genetically Stable Vaccine
- Differentiation-Dependent KLF4 Expression Promotes Lytic Epstein-Barr Virus Infection in Epithelial Cells
- The Histone Acetyltransferase Hat1 Regulates Stress Resistance and Virulence via Distinct Chromatin Assembly Pathways
- C-di-GMP Regulates Motile to Sessile Transition by Modulating MshA Pili Biogenesis and Near-Surface Motility Behavior in
- Modulation of the Surface Proteome through Multiple Ubiquitylation Pathways in African Trypanosomes
- Crystal Structure of the Human Cytomegalovirus Glycoprotein B
- Depletion of . GlmU from Infected Murine Lungs Effects the Clearance of the Pathogen
- Immunologic Control of Papillomavirus Type 1
- Requires Host Rab1b for Survival in Macrophages
- Structure Analysis Uncovers a Highly Diverse but Structurally Conserved Effector Family in Phytopathogenic Fungi
- PD-L1 Expression on Retrovirus-Infected Cells Mediates Immune Escape from CD8 T Cell Killing
- Phospho-dependent Regulation of SAMHD1 Oligomerisation Couples Catalysis and Restriction
- IL-4 Induced Innate CD8 T Cells Control Persistent Viral Infection
- Crystal Structures of a Piscine Betanodavirus: Mechanisms of Capsid Assembly and Viral Infection
- BCG Skin Infection Triggers IL-1R-MyD88-Dependent Migration of EpCAM CD11b Skin Dendritic cells to Draining Lymph Node During CD4+ T-Cell Priming
- Antigenic Characterization of the HCMV gH/gL/gO and Pentamer Cell Entry Complexes Reveals Binding Sites for Potently Neutralizing Human Antibodies
- Rescue of a Plant Negative-Strand RNA Virus from Cloned cDNA: Insights into Enveloped Plant Virus Movement and Morphogenesis
- Geminivirus Activates to Accelerate Cytoplasmic DCP2-Mediated mRNA Turnover and Weakens RNA Silencing in
- Disruption of Sphingolipid Biosynthesis Blocks Phagocytosis of
- The Fungal Exopolysaccharide Galactosaminogalactan Mediates Virulence by Enhancing Resistance to Neutrophil Extracellular Traps
- The Timing of Stimulation and IL-2 Signaling Regulate Secondary CD8 T Cell Responses
- Structural and Functional Analysis of Murine Polyomavirus Capsid Proteins Establish the Determinants of Ligand Recognition and Pathogenicity
- The Dual Role of an ESCRT-0 Component HGS in HBV Transcription and Naked Capsid Secretion
- PLOS Pathogens
- Archív čísel
- Aktuálne číslo
- Informácie o časopise
Najčítanejšie v tomto čísle- Chronobiomics: The Biological Clock as a New Principle in Host–Microbial Interactions
- Interferon-γ: The Jekyll and Hyde of Malaria
- Crosslinking of a Peritrophic Matrix Protein Protects Gut Epithelia from Bacterial Exotoxins
- Antigen-Specific Th17 Cells Are Primed by Distinct and Complementary Dendritic Cell Subsets in Oropharyngeal Candidiasis
Prihlásenie#ADS_BOTTOM_SCRIPTS#Zabudnuté hesloZadajte e-mailovú adresu, s ktorou ste vytvárali účet. Budú Vám na ňu zasielané informácie k nastaveniu nového hesla.
- Časopisy