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Ocean sound levels in the northeast Pacific recorded from an autonomous underwater glider
Authors: Joseph H. Haxel aff001; Haru Matsumoto aff001; Christian Meinig aff002; Gabriella Kalbach aff003; T.-K. Lau aff001; Robert P. Dziak aff004; Scott Stalin aff002
Authors place of work: Oregon State University and NOAA Pacific Marine Environmental Laboratory, Newport, Oregon, United States of America aff001; NOAA Pacific Marine Environmental Laboratory, Seattle, Washington, United States of America aff002; Department of Natural Sciences, California State University of Monterey Bay, Marina, California, United States of America aff003; NOAA Pacific Marine Environmental Laboratory, Newport, Oregon, United States of America aff004
Published in the journal: PLoS ONE 14(11)
Category: Research Article
doi: https://doi.org/10.1371/journal.pone.0225325Summary
Ocean gliders are a quiet and efficient mobile autonomous platform for passive acoustic monitoring and oceanographic measurements in remote marine environments. During July 20—August 6 2012, we used a Teledyne Webb Research Slocum G2 glider equipped with a hydrophone logging system to record ocean sound along a 458 km north to south traverse of the outer continental shelf break along the U.S. Pacific Northwest coast. Glider derived recordings yielded a unique perspective on the variation of ambient sound with depth, where natural wind generated surface processes were identified as a dominant acoustic contributor to spectral levels in the region. Near and far-field vessel radiated noise were also found to add significant energy to ambient conditions. Spatially distributed measurements of ambient sound levels recorded from the glider were consistent with long-term spectral estimates from fixed station, deep ocean hydrophone array measurements during the 1990–2000’s in the region. Ocean sound level measurements captured by a mobile glider are shown to be an effective and valuable asset for describing ocean surface wind conditions and characterizing spatial and temporal changes in the underwater acoustic environment over a broad regional scale.
Keywords:
Bioacoustics – Acoustics – Oceans – Oceanography – Wind – Ships – Ambient noise – Statistical noise
Introduction
Battery-powered, underwater gliders have emerged as an effective mobile technology platform for oceanographic data collection, covering vast areas of remote oceans with a stamina of months at a fraction of the cost of comparable measurements from ship based operations [1–4]. Using electric buoyancy engine technology, ocean gliders pump oil between an internal reservoir within the vehicle’s vacuum-sealed housing and an external bladder. The movement of oil in and out of the housing controls the density of the glider, thereby affecting the buoyancy force that powers its vertical motion in the water column. Wings convert hydrodynamic lift to a horizontal force that propels the glider forward, while rudder systems and mass balance controls enable horizontal navigation [2, 3]. The buoyancy driven descent/ascent, slow glide speeds (25 cm/s) and extended endurance capability to cover hundreds to several thousands of kilometers, make ocean gliders an attractive mobile platform for passive acoustic research when compared to louder, propulsion-driven autonomous underwater vehicles (AUVs) [5]. The glider’s stealth mobility and dive capabilities (up to 6000 m on Deepglider™) provide unique advantages for ecological studies of acoustically active animals by minimizing disturbance to sensitive marine mammals and fish that may otherwise avoid the noise emissions from louder vehicle platforms operating in remote and acoustically undisturbed ocean areas.
The use of ocean gliders as mobile platforms for bioacoustic recordings coupled with other in-situ environmental oceanographic sensors (e.g. temperature, salinity, optical backscatter) has provided important new ecological insights for behavioral studies of low frequency baleen whales [6–8], high frequency beaked whales [9], tracking of sperm whales and other odontocetes [10], and acoustically active fish [11] throughout a range of mesopelagic and coastal habitats. An ocean glider equipped with a hydrophone logging system provided valuable information for a geophysical study describing the acoustic signals radiating from eruptive processes at a remote submarine volcano in the western Pacific Ocean [12], and acoustic recordings from an ocean glider in the Mediterranean Sea have recently been shown to accurately predict surface wind speeds [13]. Yet, despite the onset use of underwater gliders for acoustics around 2006, little or no research has addressed measurements of ambient noise level conditions. This is likely owed to the extensive amount of self-noise produced by the gliders during operation, which can be largely ignored for marine mammal, fish and other signal identification research, but must be addressed in time series measurement and characterization of ambient sound levels. Furthermore, ocean sound has been identified as an Essential Ocean Variable (EOV) within the context of the Global Ocean Observing System (GOOS), where underwater gliders may provide a new, effective platform for sound level measurements across regional spatial scales.
Here we demonstrate a unique application for glider-based, passive acoustic recordings to measure spatial and short-term temporal patterns in underwater ambient sound levels along a broad region of the North American continental shelf break. Acoustic characterizations and sound level measurements in the northeast Pacific from fixed hydrophone stations have provided for robust time series descriptions of noise levels and long-term comparisons spanning decades [14–17]. The acoustic recordings presented in this study collected from a glider provide a spatial distribution or “snapshot” of ocean sound measurements at varying depths within a similar regional context to compare with fixed station sound level measurements in the northeast Pacific from 1994–2007 [18]. Additionally, the relative contributions from natural, wind related surface processes and anthropogenic noise radiated by vessels illuminate the frequency and time dependent importance of these dominant sound sources along the outer continental shelf of the Pacific Northwest USA.
Data and methods
Glider mission
In 2012, the National Oceanic and Atmospheric Administration’s (NOAA) Pacific Marine Environmental Laboratory operated a 1000-m-rated, Teledyne Marine G2 Slocum ocean glider down the continental shelf break from Grays Harbor, Washington to Brookings, Oregon (Fig 1). The glider was flown entirely within U.S. exclusive economic zone (EEZ) waters, not requiring a permit for access, as part of a larger NOAA effort to characterize ocean acidification along the west coast of the United States. Since the main objective of the mission was for oceanographic measurements, and vocal encounters with marine mammals were passive and coincidental, animal care and use committee approval was also not required. In addition to a suite of environmental sensors for ocean acidification research, the glider was equipped with a hydrophone and acoustic data logging system during an 18-day mission (July 20th-August 6th) from north to south along the 1000 m depth contour of the outer continental shelf break. Over the course of this nearly three-week period, the glider performed a continuous series of 402 sawtooth dive profiles (i.e. “yo’s”) to a median dive depth of 625 m while covering a horizontal distance of 458 km at an average horizontal speed of 32 cm/s. The glider was not operated to its maximum depth rating of 1000 m to avoid collision with bathymetric complexity along the shelf break.
Fig. 1. Map of the north-south glider mission down the Oregon coast. Green path shows the position of the glider. The black triangle marks the position of buoy 46089 used for wind speeds and AIS ship tracks are shown as grey lines surrounding the glider path. Circles indicate positions for vocal encounters where Pacific white-sided dolphins (blue) and humpback whales (magenta) where observed in the acoustic records. Bathymetry map was compiled and generated by Susan Merle (NOAA-PMEL/ Oregon State University) using openly accessible bathymetry data from the NOAA National Centers for Environmental Information (NCEI) and Marine Geoscience Data System (MGDS). The glider was outfitted with a single, calibrated, omni-directional hydrophone (HTI92WB –175 dB re 1V/1μPa) fastened externally on the dorsal mid-section of the glider body using a semi-soft rubber mount. Previous work has shown that acoustic receiver performance from a hydrophone mounted on the dorsal mid-section of the Slocum glider is largely unaffected by the vehicle attitude and orientation [19], and therefore in a suitable position for ambient noise level measurements. The hydrophone sensor includes a built-in single pole high pass filter with corner frequency at 50 Hz. Prior to digitization, the acoustic signal was pre-whitened to reduce the ambient noise spectrum below 20 Hz so that the 16-bit dynamic range of the acquisition system can be fully utilized. The pre-amplifier consists of a series of gain stages with filters including two one-pole high-pass filters with cutoff frequencies at 1 Hz and 20 Hz, respectively. The last stage of the pre-amplifier is an 8-pole elliptical anti-aliasing filter with a cut-off frequency (fc) at 4400 Hz and a stop band rejection ratio of -82 dB at 1.5 x fc. The conditioned signal was then digitized by a data logging system at 10 kHz sample rate and 16-bit resolution. Data is recorded continuously with each acoustic data file 12 MB in size and archived every 10 minutes from buffer storage onto a 32 GB compact flashcard. At the apogee of every third dive in a sequence, the glider would rise to the sea surface to transmit summary data of oceanographic measurements (e.g. conductivity, temperature and depth (CTD), turbidity, chlorophyll), navigation data (e.g. global positioning system (GPS) location, heading) and glider system diagnostics (e.g. vacuum, battery power) back to shore via satellite telemetry. The acoustic system, with the exception of battery power, was installed independent of the glider scientific logging system and therefore does not share circuitry that could introduce noise from other instrument sampling. Due to the large size of the files, no acoustic data was transmitted in real time during glider surfacing.
The Glider CTD provided in-situ depth profile measurements of water column properties to 650 m during glider “yo’s” at 1 Hz sample rate. Interpolated 2-dimensional cross section views of temperature, salinity and calculated sound velocity along the entire glider flight path (Fig 2) indicate relatively stable environmental conditions with strong oceanographic stratification during most of the mission except during the period when the glider was located between 44.5° – 44° N where colder water temperatures and higher salinities were observed near the surface.
Fig. 2. Two-dimensional cross sectional views of environmental data collected along the glider flight path. Water temperature (upper), salinity (mid), and calculated sound velocity (lower) measurements show the 2-D spatial structure of water column properties along the continental shelf break to 650 m depth. Glider self-noise
Despite the quieter, buoyancy driven method of locomotion compared to propeller driven AUVs, significant mechanical system noise is intermittently generated by the glider as it navigates along its “sawtooth” three dimensional course [12]. These discrete glider sounds contaminate passive acoustic recordings, masking acoustic detections of target sources [10] and introduce significant bias to ambient noise level measurements if not adequately accounted for. Slocum glider self-noises are readily identified with distinct spectral characteristics [10, 12] and elevated amplitudes that were either filtered and smoothed (rudder noise) or annotated and removed from the passive acoustic time series as data loss (pump noise, pitch battery noise).
An electric servo-motor controls the glider’s rudder for directional adjustments, emitting distinct sounds at irregular intervals that are not logged by the glider’s navigation system. Rudder noise contamination in the acoustic record was characterized by a wide-band signal [10] with elevated harmonic energy in discrete frequency bands of f1r < 1000 Hz and 2600 Hz < f2r < 4400 Hz, that occurred in short (~0.25 sec) and long (~0.6 sec) durations. The longer duration rudder noise was observed most often at the top of dives within the first 100 m of the glider descent, resulting from sustained course corrections in the stronger near surface currents. Meanwhile, the shorter duration rudder noise was found more consistently throughout the dive profiles associated with minor course adjustments. To address rudder noise contamination, rudder-generated signals were identified and removed from the acoustic time series through an automated energy summation detection algorithm [20], and weighted smoothing function (S1 Appendix). Comparisons of spectral levels prior to the smoothing correction for rudder noise indicate a reduction in noise levels of up to 30 dB re 1 μPa2/Hz in particular frequency bands most influenced by the rudder sound.
Another problematic source of system noise contamination was generated by the buoyancy engine pumping oil to and from the external bladder reservoir and glider housing to initiate dives and ascents. The glider pump noise at the top and bottom of the dives consists of a long duration (10’s of seconds), high amplitude mechanical sound that is easily recognized [10] but unlike the short duration rudder noise cannot be removed due to its longevity, therefore resulting in acoustic data loss. Similar acoustic data loss periods result from electric servo motors shifting the center of mass of the glider pressure housing by moving battery packs to assist in dives or course turns and major corrections.
Surface winds and vessel data
Wind surface measurements during the glider mission were collected from a NOAA surface buoy, National Data Buoy Center (NDBC) station 46089, 160 km WNW off the coast of Tillamook, Oregon (Fig 1). Buoy wind speeds were measured 5 m above sea level and averaged over an 8-minute period at the top of every hour. The buoy measurements were used in this study as a proxy for regional wind conditions affecting the area traversed by the glider. Although three other similar NOAA buoys were at times within closer range to the glider’s path, none of them were operational for surface wind measurements during the mission period. To assess the validity of buoy 46089 wind speeds as a proxy for regional conditions, satellite derived meridional (N-S) wind values, the strongest directional component of wind in this region during the summer upwelling season [21], were acquired from the microwave scatterometer ASCAT measuring global surface winds aboard the EUMETSATS Metop-A satellite (https://coastwatch.pfeg.noaa.gov/). ASCAT winds tracked the glider throughout its mission, providing more temporally coarse, but spatially consistent daily averages of local surface wind measurements on a 0.25° spatial scale.
Vessel traffic information surrounding the glider mission space was downloaded from NOAA and the Bureau of Ocean Energy Management’s (BOEM) MarineCadastre.gov automatic identification system (AIS) database (https://marinecadastre.gov/ais/). Raw AIS fixes including latitude, longitude, and time for a variety of vessels (e.g. container ships, tow, commercial fishing) were compiled for the glider area during the mission time frame and then transformed into daily tracklines (Fig 1) using the NOAA/BOEM AIS Track Builder 2.1.1 software in ArcGIS (https://marinecadastre.gov/ais/). A daily metric for localized vessel activity was calculated using the density of tracklines within a 50 km buffer of the daily median glider position. A 50 km buffer distance for local ship traffic was used to account for the coarse temporal and spatial resolution associated with a daily median values for the glider location and daily vessel tracks. This is based on a doubling of the average total distance traveled by the glider during a single day (27 km/day). Using a coarse transmission loss approximation TL = 15 log10(r), where TL is transmission loss and r is range from source to receiver, a 50 km daily buffer size accounts for 70 dB of transmission loss from vessel traffic sources to the glider at the most extreme ranges. This is a conservative estimate based on this simple approximation as spreading loss is likely much higher when considering propagation paths. Therefore, the loudest, low frequency ship noise radiated from large commercial vessels with source levels near 180 dB re 1 μPa [22, 23] would result in received levels within the range of sensitivity for the glider hydrophone at 110 dB re 1 μPa even at the most extreme ranges. The daily value of the total number of combined vessel-trackline kilometers within the 50 km buffer of the glider position was used for comparisons with acoustic conditions to determine the influence of localized ship traffic on ambient sound levels. Buffer ranges up to 80 km were explored without significant changes in results due to propagation energy loss effects.
Analysis and results
Sound level analysis and characterization
Acoustic data were converted to absolute pressure using a calibration correction for the hydrophone acquisition system response and sensitivity prior to analysis. Acoustic power spectral density (PSD) was calculated using a 4-second hanning window, no padding and no overlap resulting in PSD values that when combined with the average vehicle speed of 32 cm/s provide a spatial resolution on the order of 1.25 meter. Spectral levels from 10 Hz to the upper corner frequency roll-off fc = 4400 Hz plotted over the duration of the glider mission (Fig 3a) show periods of episodic wideband noise level increases often lasting several days from wind generated surface processes (e.g. August 3–4). Acoustic emissions from nearby vessels were also readily observed, at times occurring as discrete harmonic banding lasting several hours (e.g. July 30). During the first three days of the glider’s mission (July 20-July 23 2012), an active seismic airgun study was underway on the research vessel R/V Marcus G. Langseth within the coastal shelf region of southwest Washington [24]. The glider hydrophone system recorded thousands of high amplitude, low frequency (f<100Hz) airgun explosions during this time (Fig 3b). When the glider was closest to the airgun survey region (July 20), many of the received airgun signals were of sufficient amplitude to saturate the sensor resulting in a clipped record that prohibits an absolute measurement of the received sound levels. Therefore, noise level estimates from July 20, 2012 under-represent true sound levels associated with the nearby seismic survey. By July 23, the R/V Langseth had completed their survey and the glider was located off the Columbia River (46.1°N) where it continued its southward progression recording at levels within the dynamic range of the logging system for the duration of the mission.
Fig. 3. Glider spectrograms during the mission and glider dive profiles on July 30, 2012. a) A spectrogram calculated from 4 second hanning windows with no overlap showing the spectral energy content recorded during the 18 day glider mission duration. Broadband periods of elevated acoustic energy levels associated with higher wind speeds are observed over 1–3 day periods throughout the mission. b) A 15 minute period showing airgun explosion signals (10–1000 Hz) recorded by the glider near the beginning of the mission on July 22, 2012. c) A 1 day long spectrogram from July 30 showing the acoustic influence of a nearby vessel appearing as discrete bands in energy up to 3 kHz. The glider’s dive profiles throughout the day are also shown. A detailed example of the acoustic effects of nearby ship-radiated noise is shown in Fig 3c. Harmonic banding associated with propeller cavitation was observed in frequencies up to 3 kHz, lasting throughout the day on July 30, 2012. The path of the glider dive profile revealed the strong persistence in amplitude and spectral structure of the vessel noise despite minimal variation in frequency associated with the hydrophone receiver depth and spatial relationship to the source. Empirical spectral probability densities from 4 second PSD windows (SPD; [25]) at 1 Hz resolution and binned according to 3 depth zones (10–200 m; 200–400 m; > 400 m) show the depth dependent variability in sound level distributions (Fig 4). The spectral slope of the median 50th percentile curves representing “typical” acoustic conditions within the distributions remained consistent between the mid and deep water depths indicating there was little change in the frequency distribution of acoustic energy along the glider depth profiles below 200 m. Within the shallow depth interval (< 200 m), energy levels are less well constrained with lower levels of probability distributed more broadly around the median acoustic energy value at each frequency. In the shallow SPD for f < 30 Hz, some noise levels are observed at much lower amplitudes than the mid and deep water recordings. This is likely a flow noise effect as the glider speed is reduced near the surface. Additionally, the glider never reached the depths of the low velocity sound channel where more efficient propagation from distant low frequency sources could strongly affect received levels as a function of depth. Instead, spectral distributions show a characteristic broad, low frequency rise at all depths centered between 40 Hz < f < 60 Hz that we attribute to persistent regional scale commercial shipping activity [26, 27]. SPDs also reveal elevated spikes in acoustic energy levels in the 2–4 kHz frequency band (Fig 4) associated with an unknown, active low-mid frequency sound source in the glider area off the southern Oregon coast. On August 04, 2012 from 10 : 00–15 : 30, the glider recorded a series of discrete tonal sounds with received levels around 80–100 dB lasting 2 seconds and separated by 8 seconds that increased in frequency from roughly 200 Hz up to 4 kHz. The lower frequency tones from the sound source (< 1 kHz) are not resolved in the SPD plots due to the regular occurrence of noise levels at similar amplitudes.
Fig. 4. Spectral probability distributions (SPD) of acoustic energy in 3 depth intervals. SPDs calculated from 4 second hann windows, no overlap, as recorded by the glider at 3 distinct depth intervals; shallow (10–200 m); mid (200–400 m); and deep (400–650 m). Median (50th percentile) values shown as black lines and 99th and 1st percentiles shown as white lines. Non-acoustic pressure fluctuations at the hydrophone sensor interface caused by turbulent eddy vortex shedding from the glider as it moves through the water results in flow-noise contamination in certain low frequencies of the acoustic recordings. The significant change to an upward slope in spectral levels below ~ 50 Hz (Fig 4) is attributed to persistent flow-noise caused by glider turbulence present during both ascent and descent phases of the dives. Relocating the hydrophone sensor in front of the glider-induced turbulent field at the leading edge of the vehicle will mitigate this type of flow-noise contamination in future missions. Bioacoustic signals, described in more detail in the following section, were observed infrequently throughout the data set with none of these sounds recurring or of high enough amplitude to significantly affect spectral noise level distributions.
Environmental, anthropogenic and biological sources
Seasonal changes in surface wind speeds can greatly alter the underwater acoustic environment, substantially raising or lowering ocean sound levels within a region [22, 28, 29]. Along the continental shelf waters of the northeast Pacific, the summer upwelling season is driven by a strong northerly wind pattern often occurring with sustained speeds > 8 m/s and lasting several days [30]. During energetic conditions, wind speeds > 4–5 m/s mark the onset of surface wave breaking, the dominant process in wind-generated underwater ambient noise [31–34]. Piggott [35] showed for frequencies from a few hundred Hz up to 3 kHz, underwater noise levels scale with the power of the local wind speed of the form,
where the noise level (NLf) at a particular frequency or within a band is a function of the empirically derived parameters Bf and nf and the logarithm of the wind speed v. Band averaged glider derived sound levels in the frequencies most influenced by surface winds (1–1.05 kHz) [22, 29] are in reasonable agreement with surface wind speeds despite the large separation distance from regional buoy and temporally coarse satellite measurements (Fig 5a). Median noise levels were calculated from 10 cm/s wind speed bins measured at buoy 46089 and applied to a linear least squares regression of Eq (1) to derive estimates for the model parameters B(1−1.05kHz) = 54.4 and n(1−1.05kHz) = 0.37. The relationship between wind speeds greater than 4 m/s associated with surface wave breaking and depth varying acoustic noise levels measured by the glider is supported with good model performance (R2 = 0.57, p<<0.05) including a majority of values falling within the 95% confidence intervals (Fig 6) resulting in a residual mean square error of 1.7 dB. As wind speeds reach higher velocities greater than 9 m/s, the data become more scattered suggesting other significant sources were present during these high wind speeds (e.g. vessels) or a transition to another mechanism of wind generated noise at higher speeds may become more important [13, 33]. Estimates of the scaling factor for the spectral slope (nf) of wind-dependent noise levels have typically been reported in the range of 0.5–1 for higher frequencies. The shallower spectral slope observed in this study (nf = 0.37) is largely a consequence of including contributions from non-wind dependent acoustic sources (e.g. vessel noise) in the model fit.
Fig. 5. Noise level frequency band averages comparing ship and wind-dependent processes during the glider mission. a) Frequency band averaged (1–1.05 kHz) glider sound levels (thick line) plotted with wind speeds measured at buoy 46089 (thin line) and ASCAT (diamond-dash) satellite daily wind speed averages at 0.25° scale following the glider. b) Frequency band averaged (50–100 Hz) glider sound levels (thick line) and AIS ship track lengths within a 50 km radius of the daily median glider position (circle-dash). Averaged noise levels are smoothed with a 5 point median filter followed by a 6 hour low pass hann filter. Fig. 6. A linear least squares regression fit (R2 = 0.57, p << 0.05) of frequency band averaged (1–1.05 kHz) median noise levels recorded by the glider as a function of wind speeds measured at buoy 46089. Median noise levels are calculated from 10 cm/s bins and measurements from all depths are combined. 95% confidence intervals are shown as dashed lines. As a result of the reduced effects of wind induced surface wave breaking on underwater low frequency (f < 100 Hz) [22] acoustic conditions, we examined averaged sound levels in the 50–100 Hz range that is heavily influenced by ship generated sounds [36, 37] and provided a reliable estimate for vessel related noise. Spectral energy in this “ship” noise frequency range remained high during the previously mentioned seismic airgun survey that occurred north of the southbound glider through July 23 (Fig 5b). The largest amount of variability in ship noise band acoustic levels was observed from July 28-Aug 2, and presumed to be from the nearby passage of vessels. Yet this higher ship band noise variability was not reflected by similar changes in the AIS derived daily ship track length parameter. In fact, as local ship track length increased to its peak during the glider mission on August 3, corresponding ship band noise levels appeared unaffected and returned to similar, steady values observed prior to the increase in variability observed near July 28. This discrepancy in the ship track length parameter and glider received noise levels was the result of propagation loss effects in acoustic energy radiated from vessels to the glider. Using glider measured sound speed profiles, local bathymetry and AIS vessel track information, 2D propagation loss estimates from the range dependent acoustic model (RAM) [38] showed that under the oceanographically stratified conditions found along the glider path, low frequency (100 Hz) acoustic energy attenuates by 80–90 dB within 10–20 km for surface generated (5m depth) sound sources (Fig 7). Therefore, as previously mentioned, since median noise levels at 100 Hz are measured around 85 dB re 1 μPa2/Hz (Fig 4) only the largest and loudest vessels (180 dB re 1 μPa) are capable of impacting glider received ambient noise levels outside of a 10–20 km radius. Noise radiated from smaller vessels is attenuated outside of this range and does not contribute significantly to ambient conditions. Furthermore, acoustic energy loss was greater for sources propagating eastward up the continental slope from deeper water toward the glider, than for vessel paths east of the glider on the continental shelf propagating downslope toward the glider (Fig 7). Additionally, a drawback of the ship band frequencies which are averaged over 50–100 Hz is that we were unable to clearly distinguish between the persistent contribution from distant, basin wide commercial shipping versus localized effects of vessel traffic transiting within 10’s of kilometers of the glider. Therefore, far-field shipping noise was assumed to be a stable feature of the low frequency acoustic spectra (f < 100 Hz) with superimposed changes in ship band energy levels resulting from noise radiated from local (< 50 km) vessel activity.
Fig. 7. RAM propagation model output for ship noise generated from two vessel positions with respect to the glider (f = 100 Hz). (upper) Propagation loss from a range of 80 km SW of the glider traveling upslope from deeper water to the continental shelf break near 1000 m depth (lower) Energy loss from a range of 80 km to the NE of the glider propagating down the continental shelf toward the glider position. Sound source originated at 5 m depth. Scatter plots of wind and ship band sound levels (Fig 8) show the temporal and spatial patterns associated with surface generated processes and anthropogenic sources along the glider track. Elevated wind band conditions occurred intermittently, raising spectral levels on the order of 10 dB over periods of 1–3 days and showed little depth dependence. Meanwhile, ship band sound levels exhibited similar increases but occurred over much shorter intervals lasting only several hours instead of days, as expected with the passing of local ship traffic. Similar to wind dependent frequencies, ship band noise levels also exhibited limited variability throughout the 650 m glider depth profile.
Fig. 8. 2-D scatter maps showing ambient conditions along the continental shelf break from the glider’s north to south progression. The (a) wind dependent frequency band and (b) ship noise band. Noise levels are calculated from 10 minute averages and the data during the mission along the glider track is shown on the upper x-axis. Note the change in energy scale between the upper and lower figures. Biologically generated sounds including clicks, whistles and low frequency moans were observed at irregular intervals throughout the glider mission. The lower frequency component of Pacific white-sided dolphin (Lagenorhynchus obliquidens) whistles [39, 40] were the most commonly recorded bioacoustic signal with energy found mostly above 2 kHz (Fig 9a). A total of 11 vocal encounters with whistling dolphins occurred over the glider mission transect (Fig 1) with event durations lasting from between 5 minutes up to 3 hours. Often during the longer duration encounters, click trains were also observed indicative of foraging behavior. Curiously, the largest gap in time without a dolphin vocal encounter occurred between 45° - 44°N latitude from July 28–31, 2012 when the surface wind generated noise levels that overlap the dolphin frequencies were at a relative minimum and therefore acoustic detection probability was optimal, indicating the species had moved away from the area or was not vocally active. The second most commonly observed marine mammal signals were low frequency calls from humpback whales (Megaptera novaeangliae) (Fig 9b). These calls were mostly limited to frequencies less than 1 kHz [41] and found in 3 distinct areas separated by at least 100 km along the glider shelf transect (Fig 1). Vocal encounters lasted between 10 minutes to 1 hour with the longest event occurring near 44°N on July 31 a few hours prior to a dolphin vocal encounter after a large gap in bioacoustics signals. A possible reason for this return in vocal activity and species to the area could be related to the observed change in oceanographic conditions near July 31 at 44°N where the stratified layer begins to deepen after a wind relaxation (Figs 2 & 5a) and conditions become more favorable in the area for prey.
Fig. 9. Spectrograms of bioacoustic signals observed along the glider mission. (a) 7 second long spectrogram of the low frequency component of commonly observed Pacific white-sided dolphin whistles (1–4.4 kHz); (b) an 11 second long spectrogram of low frequency (10–1500 Hz) humpback whale vocalizations recorded by the glider. Comparison with long-term acoustic measurements
Long-term continuous measurements from moored hydrophones serve to reduce the effects of transient or extreme values in the acoustic characterization of a site. In comparison, averaging shorter-term, spatially distributed acoustic recordings over a larger regional area accessed by an ocean glider can reduce some of the inherent local variability in measured sound levels at low frequencies. Median spectral levels of the cumulative distribution (50th percentile) from over 12 years of data (1994–2007) at a deepwater, fixed hydrophone array off the Oregon coast [18] provide a temporally robust baseline for ambient noise level comparisons with the short-term, yet spatially distributed median levels from glider recordings in the area during 2012. Glider derived median spectra (50%) from the shallow (10–200 m), mid (200–400 m) and deep (400–650 m) water cumulative distributions of Fig 4 are slightly higher than Andrew et al.’s 12 year median values for frequencies between 50–200 Hz (Fig 10). As previously mentioned, the significant rise in spectral slope and large discrepancy between glider measurements and Andrew et al.’s levels for frequencies below 50 Hz is attributed to flow noise contamination. Glider spectral slopes from 50–130 Hz match the fixed array, with differences in energy on the order of 2–5 dB re 1 μPa2/Hz, with the deeper glider recordings most consistent with fixed array values. The glider spectral levels begin to diverge from the long-term moored array for frequencies above 200 Hz where effects from winds and local vessel noise may have more influence on the shorter duration of the glider recordings.
Fig. 10. A comparison of median (50th percentile) glider and fixed station spectral levels. Discussion
While “snapshot” recordings from ocean gliders produce the most current measure of local or regional sound levels, decadal scale averages from fixed hydrophone arrays supply the background or context for variability in ambient noise levels through a range of acoustic conditions at a particular location. Only through repeated seasonal and multi-year visits of an acoustic glider to an area lacking fixed hydrophones could similar characterizations of noise variability could be achieved. Even so, stratification in the ambient noise field from the structure of the sound speed profile may result in significant differences in received levels between a hydrophone moored at depth and the depth varying glider sensor. Nevertheless, the side by side comparison of Andrew et al.’s long-term sound levels with glider derived measurements in this study are encouraging for the utilization of ocean gliders as an underwater noise measurement platform. Despite median spectra being consistently higher by a few dB in the 10 Hz – 400 Hz frequency range, the glider noise levels remain well within the 90th percentile of cumulative distribution values from the 12 year fixed array measurements [18].
During the glider mission, significant contributions to ambient levels were recorded from seismic airguns, distant and local vessel radiated noise and wind generated surface processes. At times, complicated interactions between these sources resulted in wideband, elevated noise levels that were difficult to untangle. To best describe overall changes in ambient noise conditions, we did not restrict our analysis to discrete periods of ship or wind dependent noise in order to constrain the contributions from these sources [13, 33]. Instead, we incorporated all sources and focused on frequency bands influenced by particular processes. For example, sound levels in the 50–100 Hz frequency band were used as an indicator for near and far-field shipping activity, where contributions related to surface wind speeds were limited. Nevertheless, near the beginning of the glider mission this low frequency band was dominated by seismic airgun activity (Figs 5b and 8b). The frequency band 1–1.05 kHz used in our analysis to describe the influence of wind generated sound at the sea surface unfortunately also carries significant amount of local vessel noise (Fig 3c). Interestingly, biological signals from marine mammals common to the area did not have a significant impact on the distribution of spectral levels observed during the 18 day mission. Despite 11 vocal encounters with Pacific white-sided dolphins and 3 with humpback whales spread over the mission duration, the calling events were not persistent or high enough amplitude to sufficiently influence spectral levels over the time periods in this study. Similarly, the highly seasonal and consistent blue and fin whale vocalizations previously observed in this area of the northeast Pacific peak in activity during the fall months after the glider had transited the area [42, 43].
The ambient noise in the 50–100 Hz frequency band was not well correlated with the total daily ship track length metric from AIS data owed largely to significant attenuation loss along the propagation paths. RAM propagation loss model results indicated that smaller vessels transiting 10–20 km outside of the glider position had little to no effect on low frequency ambient noise levels, and that only the largest vessels with source levels near 180 dB re 1 μPa inside the 50 km buffer range could impact acoustic conditions near the glider. Additionally, the orientation of the vessel noise source east or west of the glider track along the continental shelf break had an impact on propagation loss where acoustic energy traveling upslope attenuated more rapidly and to a greater degree than energy loss downslope. The 50 km buffer for vessel track length incorporated larger vessel radiated noise, but introduced bias from smaller vessels that did not generate high enough amplitude sounds to be influential outside of the first 10–20 km from the source. Additionally, gaps in AIS transmissions can occur from poor quality equipment on the vessels or receiver station and can even be intentional on fishing vessels that disable their AIS systems to maintain privacy on fishing grounds [44] which could have also created inconsistencies between noise levels and total vessel track length.
Estimates of the relationship between surface winds and glider noise levels in the 1–1.05 kHz frequency band were challenged by the long distances between the glider and buoy 46089. Despite this physical separation, wind generated sounds were shown to be a consistent and predictable feature within the ambient spectra of the region, fluctuating as a function of the regionally representative proxy of measured wind speed at buoy 46089. Future glider missions targeting under water acoustic measures of surface wind speed magnitudes should focus on periods devoid of other sources (e.g. vessels) to further constrain this relationship. Furthermore, the transition from wind driven noise processes observed between 4–10 m/s to a second regime with wind speeds 10–20 m/s involving insulating bubble clouds and other high wind generated phenomenon near the surface need to be accounted for in order to properly describe the full range of influence on wind-dependent sound levels [13].
Conclusions
Results from this study and another in the Mediterranean Sea [13], have shown the value of glider derived sound level measurements as a tool for climatic studies of ocean-atmosphere interaction using subsurface acoustic noise levels to predict sea surface wind speed magnitudes in remote ocean areas. Glider derived wind speed estimates from underwater acoustic measurements have the distinct advantage that they can be made far from destructive surface processes experienced by buoys. Therefore, in remote ocean areas, acoustic ocean gliders may be a robust and long-lived alternative to buoy measurements of surface winds requiring less maintenance and cost over time.
In addition to sea surface wind speed estimates, we’ve also shown that glider derived acoustic measurements are effective for characterizing regional-scale variability of ocean sound levelsin the northeast Pacific. Ocean gliders provide capacity for filling knowledge gaps on acoustic conditions where information is limited. Repeated glider surveys within a region of concern for acoustic habitat degradation can provide important real-time measurements of changing noise levels resulting from anthropogenic activities. Considering alternate mobile platforms capable of noise level assessments over large, remote ocean areas, ocean gliders provide significant advantages. For instance, the Wave Glider is a highly efficient, far ranging unmanned surface vehicle (USV) with towed hydrophone system capabilities. Nevertheless, the surface limited vehicle tows hydrophones at fixed, shallow depth (~10m)[45], where recordings are inherently contaminated from physical processes (waves, wind) and motion of the sensor. To enable accurate low frequency recordings and avoid flow-noise contamination from surface processes (wave orbital motions), the hydrophone sensors need to be decoupled from the vertical and horizontal accelerations of the USV. This is not required by the deep diving ocean gliders, as they move out of the active wave zone near the surface and whose relative slower motion reduces flow-noise in comparison to faster moving surface vehicles. Utilized as an alternative or supplement to long-term moored hydrophone arrays targeting temporal changes in particular marine environments [46], glider derived measurements offer enhanced spatial perspectives that are critical for informed management and regulatory decisions for acoustic habitat protection [47].
Supporting information
S1 Appendix [docx]
A method for the identification, removal and smoothing of glider rudder self-noise.S1 Fig [tif]
An example of the removal and smoothing algorithm for glider rudder noise contamination in the acoustic time series.
Zdroje
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- Mathematical modeling reveals the factors involved in the phenomena of cancer stem cells stabilization
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- Evaluation of comprehensive improvement for mild and moderate soil salinization in arid zone
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- Characterization of two thermophilic cellulases from Talaromyces leycettanus JCM12802 and their synergistic action on cellulose hydrolysis
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- Improving the antimicrobial efficacy against resistant Staphylococcus aureus by a combined use of conjugated oligoelectrolytes
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- Ion torrent high throughput mitochondrial genome sequencing (HTMGS)
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- A smart tele-cytology point-of-care platform for oral cancer screening
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- Microbial metabolisms in an abyssal ferromanganese crust from the Takuyo-Daigo Seamount as revealed by metagenomics
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- The impact of short-term machine perfusion on the risk of cancer recurrence after rat liver transplantation with donors after circulatory death
- Proteomic profiling of the thrombin-activated canine platelet secretome (CAPS)
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- The effects of prolonged single night session of videogaming on sleep and declarative memory
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- Mapping developmental QTL for plant height in soybean [Glycine max (L.) Merr.] using a four-way recombinant inbred line population
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- Positive selection and precipitation effects on the mitochondrial NADH dehydrogenase subunit 6 gene in brown hares (Lepus europaeus) under a phylogeographic perspective
- Evaluation of Minimum Inhibitory Concentrations for 154 Mycoplasma synoviae isolates from Italy collected during 2012-2017
- Enhancement of antibiotics antimicrobial activity due to the silver nanoparticles impact on the cell membrane
- Correction: Smoking, alcohol use disorder and tuberculosis treatment outcomes: A dual co-morbidity burden that cannot be ignored
- Correction: Effect of corruption on perceived difficulties in healthcare access in sub-Saharan Africa
- Knowledge-based best of breed approach for automated detection of clinical events based on German free text digital hospital discharge letters
- Importance of thorough tissue and cellular level characterization of targeted drugs in the evaluation of pharmacodynamic effects
- Integrated value-chain and risk assessment of Pig-Related Zoonoses in Ghana
- Failed sperm retrieval from severely oligospermic or non-obstructive azoospermic patients on oocyte retrieval day: Emergent oocyte cryopreservation is a feasible strategy
- Cassava yield traits predicted by genomic selection methods
- Verification of hub genes in the expression profile of aortic dissection
- Pig farmers’ willingness to pay for management strategies to reduce aggression between pigs
- Metabolomic response of Euglena gracilis and its bleached mutant strain to light
- Diagnostic value of ASVS for insulinoma localization: A systematic review and meta-analysis
- Newly educated care managers’ experiences of providing care for persons with stress-related mental disorders in the clinical primary care context
- Real-time telemetry monitoring of oxygen in the central complex of freely-walking Gromphadorhina portentosa
- Qualification programmes for immigrant health professionals: A systematic review
- An analytical model to minimize the latency in healthcare internet-of-things in fog computing environment
- Grain filling of early-season rice cultivars grown under mechanical transplanting
- Intercalation of small molecules into DNA in chromatin is primarily controlled by superhelical constraint
- Correlative evidence for co-regulation of phosphorus and carbon exchanges with symbiotic fungus in the arbuscular mycorrhizal Medicago truncatula
- How to design a dose-finding study on combined agents: Choice of design and development of R functions
- Altered expression of Notch1 in Alzheimer's disease
- The ZJU index is a powerful surrogate marker for NAFLD in severely obese North American women
- Trunk velocity-dependent Light Touch reduces postural sway during standing
- Evaluation of cytological diagnostic accuracy for canine splenic neoplasms: An investigation in 78 cases using STARD guidelines
- Trade-offs in motivating volunteer effort: Experimental evidence on voluntary contributions to science
- Does caching strategy vary with microclimate in endangered Mt. Graham red squirrels?
- Assessment of energy expenditure during high intensity cycling and running using a heart rate and activity monitor in young active adults
- Evaluating rectal swab collection method for gut microbiome analysis in the common marmoset (Callithrix jacchus)
- Implementation of a screening, brief intervention and referral to treatment programme for risky substance use in South African emergency centres: A mixed methods evaluation study
- Can the CalproQuest predict a positive Calprotectin test? A prospective diagnostic study
- The calcium sensor OsCBL1 modulates nitrate signaling to regulate seedling growth in rice
- Acceptability of and treatment preferences for recurrent bacterial vaginosis—Topical lactic acid gel or oral metronidazole antibiotic: Qualitative findings from the VITA trial
- Mathematical determination of the HIV-1 matrix shell structure and its impact on the biology of HIV-1
- Contingent negative variation during a modified cueing task in simulated driving
- CAMDI interacts with the human memory-associated protein KIBRA and regulates AMPAR cell surface expression and cognition
- Effect of feeding patterns on growth and nutritional status of children aged 0-24 months: A Chinese cohort study
- A fecal sequel: Testing the limits of a genetic assay for bat species identification
- Measuring the impact of chronic conditions and associated multimorbidity on health-related quality of life in the general population in Hong Kong SAR, China: A cross-sectional study
- Short and long-term clinical effectiveness and cost-effectiveness of a late-phase community-based balance and gait exercise program following hip fracture. The EVA-Hip Randomised Controlled Trial
- Vaccine cold chain in general practices: A prospective study in 75 refrigerators (Keep Cool study)
- Brazilian norms for the Bank of Standardized Stimuli (BOSS)
- Distinct varieties of aesthetic chills in response to multimedia
- Interaction between apolipoprotein E genotype and hypertension on cognitive function in older women in the Nurses’ Health Study
- Correction: Resistance profile of the HIV-1 maturation inhibitor GSK3532795 in vitro and in a clinical study
- New formulation of the Gompertz equation to describe the kinetics of untreated tumors
- Development of visual perception of others’ actions: Children’s judgment of lifted weight
- Retrospective comparative analysis of intraocular lens calculation formulas after hyperopic refractive surgery
- Human vitreous concentrations of citicoline following topical application of citicoline 2% ophthalmic solution
- Development and validation of exhaled breath condensate microRNAs to identify and endotype asthma in children
- Arthroscopic release for frozen shoulder: Does the timing of intervention and diabetes affect outcome?
- Risk factors affecting dairy cattle protective grouping behavior, commonly known as bunching, against Stomoxys calcitrans (L.) on California dairies
- Acceleration of chemical shift encoding-based water fat MRI for liver proton density fat fraction and T2* mapping using compressed sensing
- Characterisation and microbial community analysis of lipid utilising microorganisms for biogas formation
- Sexuality in male partners of women with fibromyalgia syndrome: A qualitative study
- Exploring optimization strategies for improving explicit water models: Rigid n-point model and polarizable model based on Drude oscillator
- Artificial insemination with fresh, liquid stored and frozen thawed semen in dromedary camels
- Moving into an urban drug scene among people who use drugs in Vancouver, Canada: Latent class growth analysis
- Numerical study on the start and unstart phenomena in a scramjet inlet-isolator model
- Effects of dietary supplementation with apple peel powder on the growth, blood and liver parameters, and transcriptome of genetically improved farmed tilapia (GIFT, Oreochromis niloticus)
- Urban growth simulation in different scenarios using the SLEUTH model: A case study of Hefei, East China
- Chronic bronchitis without airflow obstruction, asthma and rhinitis are differently associated with cardiovascular risk factors and diseases
- Factors associated with medication adherence among people with diabetes mellitus in poor urban areas of Cambodia: A cross-sectional study
- Mammary microbiome of lactating organic dairy cows varies by time, tissue site, and infection status
- Force field generalization and the internal representation of motor learning
- Polyphenism of visual and chemical secondary sexually-selected wing traits in the butterfly Bicyclus anynana: How different is the intermediate phenotype?
- Minimal genetic differentiation of the malaria vector Nyssorhynchus darlingi associated with forest cover level in Amazonian Brazil
- The impact of leisure activities on older adults’ cognitive function, physical function, and mental health
- scafSLICR: A MATLAB-based slicing algorithm to enable 3D-printing of tissue engineering scaffolds with heterogeneous porous microarchitecture
- Association of serum leptin and adiponectin concentrations with echocardiographic parameters and pathophysiological states in patients with cardiovascular disease receiving cardiovascular surgery
- Operation of cognitive memory inhibition in adults with Down syndrome: Effects of maintenance load and material
- Influences on surgical antimicrobial prophylaxis decision making by surgical craft groups, anaesthetists, pharmacists and nurses in public and private hospitals
- Post-treatment Lyme disease symptoms score: Developing a new tool for research
- Expression of Concern: The Role of the RACK1 Ortholog Cpc2p in Modulating Pheromone-Induced Cell Cycle Arrest in Fission Yeast
- Equine bronchial fibroblasts enhance proliferation and differentiation of primary equine bronchial epithelial cells co-cultured under air-liquid interface
- Investigating cooperation with robotic peers
- Synthesis, purification and crystallization of a putative critical bulge of HAR1 RNA
- Prosthetic push-off power in trans-tibial amputee level ground walking: A systematic review
- A case study of the use of verbal reports for talent identification purposes in soccer: A Messi affair!
- Transgenerational deep sequencing revealed hypermethylation of hippocampal mGluR1 gene with altered mRNA expression of mGluR5 and mGluR3 associated with behavioral changes in Sprague Dawley rats with history of prolonged febrile seizure
- Obesity is associated with an impaired survival in lymphoma patients undergoing autologous stem cell transplantation
- Periodontal disease: Repercussions in pregnant woman and newborn health—A cohort study
- Origins of Chinese reindeer (Rangifer tarandus) based on mitochondrial DNA analyses
- Regional, racial, gender, and tumor biology disparities in breast cancer survival rates in Africa: A systematic review and meta-analysis
- How effective are films in inducing positive and negative emotional states? A meta-analysis
- 3D nanostructural characterisation of grain boundaries in atom probe data utilising machine learning methods
- An outbreak of tuberculosis in a middle school in Henan, China: Epidemiology and risk factors
- Initial clinical radiological findings and staging to predict prognosis of primary hepatic angiosarcoma: A retrospective analysis
- A new early Eocene deperetellid tapiroid illuminates the origin of Deperetellidae and the pattern of premolar molarization in Perissodactyla
- Longevity and marginal bone loss of narrow-diameter implants supporting single crowns: A systematic review
- Impact of UVC-sustained recirculating air filtration on airborne bacteria and dust in a pig facility
- Cold-related Florida manatee mortality in relation to air and water temperatures
- Conceptual fluency in inductive reasoning
- Clinical outcomes and treatment patterns among Medicare patients with nonvalvular atrial fibrillation (NVAF) and chronic kidney disease
- Improvements in the learnability of smartphone haptic interfaces for visually impaired users
- Role of the malic enzyme in metabolism of the halotolerant methanotroph Methylotuvimicrobium alcaliphilum 20Z
- Cyclic loading test study on a new cast-in-situ insulated sandwich concrete wall
- Natural compounds as angiogenic enzyme thymidine phosphorylase inhibitors: In vitro biochemical inhibition, mechanistic, and in silico modeling studies
- Analysis of virulence potential of Escherichia coli O145 isolated from cattle feces and hide samples based on whole genome sequencing
- Pre-clinical medical student reflections on implicit bias: Implications for learning and teaching
- Prognostic significance of non-sustained ventricular tachycardia on stored electrograms in pacemaker recipients
- Determinants of preterm birth among mothers who gave birth at public hospitals in the Amhara region, Ethiopia: A case-control study
- Real-world evidence of the effectiveness of ombitasvir-paritaprevir/r ± dasabuvir ± ribavirin in patients monoinfected with chronic hepatitis C or coinfected with human immunodeficiency virus-1 in Spain
- Unique transcriptomic landscapes identified in idiopathic spontaneous and infection related preterm births compared to normal term births
- Restrained expansion of the recall germinal center response as biomarker of protection for influenza vaccination in mice
- Arabidopsis TRM5 encodes a nuclear-localised bifunctional tRNA guanine and inosine-N1-methyltransferase that is important for growth
- Achievement of weight loss in patients with overweight during dietetic treatment in primary health care
- Autophagy deficiency exacerbates colitis through excessive oxidative stress and MAPK signaling pathway activation
- The impacts of parity on lung function data (LFD) of healthy females aged 40 years and more issued from an upper middle income country (Algeria): A comparative study
- Reorganization of spatial configurations in visual working memory: A matter of set size?
- Unravelling travellers’ route choice behaviour at full-scale urban network by focusing on representative OD pairs in computer experiments
- Evaluating the higher-order structure of the Profile of Emotional Competence (PEC): Confirmatory factor analysis and Bayesian structural equation modeling
- HIV prevalence and correlated factors among male clients of female sex workers in a border region of China
- Next generation sequencing and RNA-seq characterization of adipose tissue in the Nile crocodile (Crocodylus niloticus) in South Africa: Possible mechanism(s) of pathogenesis and pathophysiology of pansteatitis
- Association between advanced maternal age and maternal and neonatal morbidity: A cross-sectional study on a Spanish population
- Ethnic differences in the prevalence, socioeconomic and health related risk factors of knee pain and osteoarthritis symptoms in older Malaysians
- Increasing knowledge of HIV status in a country with high HIV testing coverage: Results from the Botswana Combination Prevention Project
- Friends with benefits: The effects of vegetative shading on plant survival in a green roof environment
- Comparison of the fecal, cecal, and mucus microbiome in male and female mice after TNBS-induced colitis
- Identifying candidate diagnostic markers for early stage of non-small cell lung cancer
- Complex alternative splicing of human Endonuclease V mRNA, but evidence for only a single protein isoform
- Correction: KML001 Induces Apoptosis and Autophagic Cell Death in Prostate Cancer Cells via Oxidative Stress Pathway
- Unique developmental trajectories of risk behaviors in adolescence and associated outcomes in young adulthood
- Enhanced fibrinolysis detection in a natural occurring canine model with intracavitary effusions: Comparison and degree of agreement between thromboelastometry and FDPs, D-dimer and fibrinogen concentrations
- Overexpression of Saussurea involucrata dehydrin gene SiDHN promotes cold and drought tolerance in transgenic tomato plants
- Foxtail millet (Setaria italica (L.) P. Beauv) CIPKs are responsive to ABA and abiotic stresses
- Autonomous drone hunter operating by deep learning and all-onboard computations in GPS-denied environments
- Heterogeneity Diffusion Imaging of gliomas: Initial experience and validation
- Frequency cluster formation and slow oscillations in neural populations with plasticity
- DHP23002 as a next generation oral paclitaxel formulation for pancreatic cancer therapy
- Diagnostic accuracy of SOX11 immunohistochemistry in mantle cell lymphoma: A meta-analysis
- Analytical solution to swing equations in power grids
- Pathways to conspiracy: The social and linguistic precursors of involvement in Reddit’s conspiracy theory forum
- Spatiotemporally random and diverse grid cell spike patterns contribute to the transformation of grid cell to place cell in a neural network model
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- Who is more susceptible to job stressors and resources? Sensory-processing sensitivity as a personal resource and vulnerability factor
- Cost-effectiveness of integrating postpartum antiretroviral therapy and infant care into maternal & child health services in South Africa
- A substitution mutation in a conserved domain of mammalian acetate-dependent acetyl CoA synthetase 2 results in destabilized protein and impaired HIF-2 signaling
- One step at a time: Physical activity is linked to positive interpretations of ambiguity
- Calreticulin regulates vascular endothelial growth factor-A mRNA stability in gastric cancer cells
- Evaluation of various methods of selection of B. subtilis strains capable of secreting surface-active compounds
- Association between US Pharmacopeia (USP) monograph standards, generic entry and prescription drug costs
- Molecular characterisation of the synovial fluid microbiome in rheumatoid arthritis patients and healthy control subjects
- On sorption hysteresis in wood: Separating hysteresis in cell wall water and capillary water in the full moisture range
- Inbreeding, Allee effects and stochasticity might be sufficient to account for Neanderthal extinction
- Reliability and construct validity of the stepping-forward affordance perception test for fall risk assessment in community-dwelling older adults
- Socioeconomic determinants of nutritional status among ‘Baiga’ tribal children In Balaghat district of Madhya Pradesh: A qualitative study
- Study on characteristics of fire plume in building facade window under lateral blow
- ‘When you talk to someone in a bad way or always put her under pressure, it is actually worse than beating her’: Conceptions and experiences of emotional intimate partner violence in Rwanda and South Africa
- Effects of 6-mercaptopurine in pressure overload induced right heart failure
- The association between haemoglobin levels in the first 20 weeks of pregnancy and pregnancy outcomes
- Implementation and evaluation of an antimicrobial stewardship programme in companion animal clinics: A stepped-wedge design intervention study
- Factors associated with persistently high-cost health care utilization for musculoskeletal pain
- Nitrogen and chlorophyll status determination in durum wheat as influenced by fertilization and soil management: Preliminary results
- Effect of repeated in vivo microCT imaging on the properties of the mouse tibia
- Coupling environment and physiology to predict effects of climate change on the taxonomic and functional diversity of fish assemblages in the Murray-Darling Basin, Australia
- Hematology and plasma biochemistries in the Blanding’s turtle (Emydoidea blandingii) in Lake County, Illinois
- CRISPR-Cas influences the acquisition of antibiotic resistance in Klebsiella pneumoniae
- Phosphorylation-dependent activity-based conformational changes in P21-activated kinase family members and screening of novel ATP competitive inhibitors
- Antidepressant prescriptions, discontinuation, depression and perinatal outcomes, including breastfeeding: A population cohort analysis
- Why men with a low-risk prostate cancer select and stay on active surveillance: A qualitative study
- Imported severe malaria and risk factors for intensive care: A single-centre retrospective analysis
- Combined treatment (image-guided thrombectomy and endovascular therapy with open femoral access) for acute lower limb ischemia: Clinical efficacy and outcomes
- Low-latency single channel real-time neural spike sorting system based on template matching
- Quantifying the scale effect in geospatial big data using semi-variograms
- Paper-and-pencil versus computerized administration mode: Comparison of data quality and risk behavior prevalence estimates in the European school Survey Project on Alcohol and other Drugs (ESPAD)
- Regression adjusted colocalisation colour mapping (RACC): A novel biological visual analysis method for qualitative colocalisation analysis of 3D fluorescence micrographs
- Ostrich eggshell bead diameter in the Holocene: Regional variation with the spread of herding in eastern and southern Africa
- Spatial and temporal variations in female size at maturity of a Southern Rock Lobster (Jasus edwardsii) population: A likely response to climate change
- Inactive USP14 and inactive UCHL5 cause accumulation of distinct ubiquitinated proteins in mammalian cells
- Training rhesus macaques to take daily oral antiretroviral therapy for preclinical evaluation of HIV prevention and treatment strategies
- Left ventricular structural and functional changes in Friedreich ataxia – Relationship with body size, sex, age and genetic severity
- Magnitude and factors associated with anemia among pregnant women attending antenatal care in Bench Maji, Keffa and Sheka zones of public hospitals, Southwest, Ethiopia, 2018: A cross -sectional study
- Effectiveness of telerehabilitation in the management of adults with stroke: A systematic review
- Hydrogen sulphide-induced hypometabolism in human-sized porcine kidneys
- Correction: Comparison of the molecular properties of retinitis pigmentosa P23H and N15S amino acid replacements in rhodopsin
- Retraction: Regulation of gastric smooth muscle contraction via Ca2+-dependent and Ca2+-independent actin polymerization
- Evaluation of neutral oral contrast agents for assessment of the small bowel at abdominal staging CT
- Blood type and breed-associated differences in cell marker expression on equine bone marrow-derived mesenchymal stem cells including major histocompatibility complex class II antigen expression
- Induced abortion and future use of IVF treatment; A nationwide register study
- Psychosocial determinants of sustained maternal functional impairment: Longitudinal findings from a pregnancy-birth cohort study in rural Pakistan
- Measurement of finger joint angle using stretchable carbon nanotube strain sensor
- Determinants of mortality among patients with drug-resistant tuberculosis in northern Nigeria
- Drugs modulating stochastic gene expression affect the erythroid differentiation process
- Efficacy of UB0316, a multi-strain probiotic formulation in patients with type 2 diabetes mellitus: A double blind, randomized, placebo controlled study
- Prognostic value of des-γ-carboxy prothrombin in patients with hepatocellular carcinoma treated with transarterial chemotherapy: A systematic review and meta-analysis
- Avermectin induces the oxidative stress, genotoxicity, and immunological responses in the Chinese Mitten Crab, Eriocheir sinensis
- Antibiotic use in mandarin production (Citrus reticulata Blanco) in major mandarin-producing areas in Thailand: A survey assessment
- Application of CPI cutoff value based on parentage testing of duos and trios typed by four autosomal kits
- Correction: Good and Bad in the Hands of Politicians: Spontaneous Gestures during Positive and Negative Speech
- Adolescents with worse levels of oral health literacy have more cavitated carious lesions
- Effective methods for the inactivation of Francisella tularensis
- Detection of early-stage Alzheimer’s pathology using blood-based autoantibody biomarkers in elderly hip fracture repair patients
- Correlation between internal pudendal artery stenosis and erectile dysfunction in patients with suspected coronary artery disease
- Analysis of HER2 genomic binding in breast cancer cells identifies a global role in direct gene regulation
- Population productivity of shovelnose rays: Inferring the potential for recovery
- Correction: Long-term clinical outcomes in a cohort of patients with solitary plasmacytoma treated in the modern era
- Effects of tetracycline on myocardial infarct size in obese rats with chemically-induced colitis
- Mineral absorption is an enriched pathway in a brain region of restless legs syndrome patients with reduced MEIS1 expression
- Changes in weight and body composition across five years at university: A prospective observational study
- Adeno-associated virus-mediated expression of human butyrylcholinesterase to treat organophosphate poisoning
- Effects of insulin signaling on mouse taste cell proliferation
- Patient-level cost of home- and facility-based child pneumonia treatment in Suba Sub County, Kenya
- TAP: A static analysis model for PHP vulnerabilities based on token and deep learning technology
- Cost-effectiveness of QuantiFERON-TB Gold In-Tube versus tuberculin skin test for diagnosis and treatment of Latent Tuberculosis Infection in primary health care workers in Brazil
- Multifaceted intervention for the prevention and management of musculoskeletal pain in nursing staff: Results of a cluster randomized controlled trial
- Changes over time in creatinine clearance and comparison of emergent adverse events for HIV-positive adults receiving standard doses (300 mg/day) of lamivudine-containing antiretroviral therapy with baseline creatinine clearance of 30–49 vs ≥50 mL/min
- Population dynamics of foxes during restricted-area culling in Britain: Advancing understanding through state-space modelling of culling records
- Impacts of experimental advisory exit speed sign on traffic speeds for freeway exit ramp
- In-hospital outcomes and 30-day readmission rates among ischemic and hemorrhagic stroke patients with delirium
- Monitoring quality indicators for the Xpert MTB/RIF molecular assay in Ethiopia
- Delivering genes across the blood-brain barrier: LY6A, a novel cellular receptor for AAV-PHP.B capsids
- Correction: Using remote sensing to detect whale strandings in remote areas: The case of sei whales mass mortality in Chilean Patagonia
- Comparison of the inoculum size effects of antibiotics on IMP-6 β-lactamase-producing Enterobacteriaceae co-harboring plasmid-mediated quinolone resistance genes
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- Non-invasive in vivo imaging of UCP1 expression in live mice via near-infrared fluorescent protein iRFP720
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- Increased amounts and stability of telomeric repeat-containing RNA (TERRA) following DNA damage induced by etoposide
- Patients with limitation or withdrawal of life supporting care admitted in a medico-surgical intermediate care unit: Prevalence, description and outcome over a six-month period
- Correction: Diverse radiofrequency sensitivity and radiofrequency effects of mobile or cordless phone near fields exposure in Drosophila melanogaster
- Predicting the performance of TV series through textual and network analysis: The case of Big Bang Theory
- Risk of temperature, humidity and concentrations of air pollutants on the hospitalization of AECOPD
- Mixed methods grant applications in the health sciences: An analysis of reviewer comments
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- Size matters: How reaching and vergence movements are influenced by the familiar size of stereoscopically presented objects
- Willingness to receive institutional and community-based eldercare among the rural elderly in China
- An improved deep learning method for predicting DNA-binding proteins based on contextual features in amino acid sequences
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- A LAMP assay for the rapid and robust assessment of Wolbachia infection in Aedes aegypti under field and laboratory conditions
- Nonarteritic anterior ischemic optic neuropathy is associated with cerebral small vessel disease
- Fiber-tract localized diffusion coefficients highlight patterns of white matter disruption induced by proximity to glioma
- The fight against polio through the NO-DO newsreels during the Francoism period in Spain
- Ocean sound levels in the northeast Pacific recorded from an autonomous underwater glider
- Cost-consequence analysis of influenza vaccination among the staff of a large teaching hospital in Rome, Italy: A pilot study
- The relationship among the progression of inflammation in umbilical cord, fetal inflammatory response, early-onset neonatal sepsis, and chorioamnionitis
- How medical professional students view older people with dementia: Implications for education and practice
- An enhanced nonparametric EWMA sign control chart using sequential mechanism
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- Adsorption of oxytetracycline on kaolinite
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- The role of resource transfer in positive, non-additive litter decomposition
- The impact of language on the interpretation of resuscitation clinical care plans by doctors. A mixed methods study
- Quantum dots reveal heterogeneous membrane diffusivity and dynamic surface density polarization of dopamine transporter
- Genomic analysis of Shiga toxin-producing Escherichia coli from patients and asymptomatic food handlers in Japan
- The heavy metals lead and cadmium are cytotoxic to human bone osteoblasts via induction of redox stress
- Anatomical, taxonomic, and phylogenetic reappraisal of a poorly known ghost knifefish, Tembeassu marauna (Ostariophysi: Gymnotiformes), using X-ray microcomputed tomography
- Matrix-assisted laser desorption/ionization time of flight mass spectrometry identification of Vibrio (Listonella) anguillarum isolated from sea bass and sea bream
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- The winner takes it all—Competitiveness of single nodes in globalized supply networks
- Hamsters in the city: A study on the behaviour of a population of common hamsters (Cricetus cricetus) in urban environment
- Correction: Liquid biopsies for omics-based analysis in sentinel mussels
- Size matters! Association between journal size and longitudinal variability of the Journal Impact Factor
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- A model-based framework for chronic hepatitis C prevalence estimation
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- Clinical determinants of social media use in individuals with schizophrenia
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- A single plasmid based CRISPR interference in Synechocystis 6803 – A proof of concept
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- Temporal trends in intracerebral hemorrhage: Evidence from the Austrian Stroke Unit Registry
- Prevalence and risk factors for multi-drug resistant Escherichia coli among poultry workers in the Federal Capital Territory, Abuja, Nigeria
- Prediction of disease-related metabolites using bi-random walks
- Clinical use, efficacy, and durability of maraviroc for antiretroviral therapy in routine care: A European survey
- Biomarker discovery in inflammatory bowel diseases using network-based feature selection
- The Cinderella Complex: Word embeddings reveal gender stereotypes in movies and books
- Exoproteome profiling of Trypanosoma cruzi during amastigogenesis early stages
- Reproducible phenotype alteration due to prolonged cooling of the pupae of Polyommatus icarus butterflies
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- Pharmacy-based predictors of non-adherence, non-persistence and reinitiation of antihypertensive drugs among patients on oral diabetes drugs in the Netherlands
- Systematic review of the accuracy of plasma preparation tubes for HIV viral load testing
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- “Anybody can make kids; it takes a real man to look after your kids”: Aboriginal men’s discourse on parenting
- Correction: A 1D computer model of the arterial circulation in horses: An important resource for studying global interactions between heart and vessels under normal and pathological conditions
- Maternal interpregnancy weight change and premature birth: Findings from an English population-based cohort study
- Correction: Identifying performance benchmarks and determinants for reproductive performance and calf survival using a longitudinal field study of cow-calf herds in western Canada
- Prognostic value of the model for end-stage liver disease excluding INR score (MELD-XI) in patients with adult congenital heart disease
- Treatment of Urethral Pain Syndrome (UPS) in Sweden
- Migration and political polarization in the U.S.: An analysis of the county-level migration network
- Epidemiology and complications of late-onset sepsis: an Italian area-based study
- The relationship between women’s experience of intimate partner violence and other socio-demographic factors, and under-5 children’s health in South Africa
- Association between trunk and gluteus muscle size and long jump performance
- Multimorbidity and complex multimorbidity in Brazilian rural workers
- Correction: Interspecific Phylogenic Relationships within Genus Melilotus Based on Nuclear and Chloroplast DNA
- Insulin-like growth factor (IGF)-II- mediated fibrosis in pathogenic lung conditions
- Wolf diet and prey selection in the South-Eastern Carpathian Mountains, Romania
- In vitro activity of aryl-thiazole derivatives against Schistosoma mansoni schistosomula and adult worms
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- Mouse movement measures enhance the stop-signal task in adult ADHD assessment
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- Correction: KETOS: Clinical decision support and machine learning as a service – A training and deployment platform based on Docker, OMOP-CDM, and FHIR Web Services
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- Long-term high-grain diet altered the ruminal pH, fermentation, and composition and functions of the rumen bacterial community, leading to enhanced lactic acid production in Japanese Black beef cattle during fattening
- Beyond detoxification: Pleiotropic functions of multiple glutathione S-transferase isoforms protect mice against a toxic electrophile
- Golgi reassembly and stacking protein 65 downregulation is required for the anti-cancer effect of dihydromyricetin on human ovarian cancer cells
- SSR marker development in Clerodendrum trichotomum using transcriptome sequencing
- Risk factors for the carriage of Streptococcus infantarius subspecies infantarius isolated from African fermented dairy products
- Development of an intervention tool for precision oral self-care: Personalized and evidence-based practice for patients with periodontal disease
- Personal values in adolescence and psychological distress in adults: A cross-sectional study based on a retrospective recall
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- Clinical utility of combined preimplantation genetic testing methods in couples at risk of passing on beta thalassemia/hemoglobin E disease: A retrospective review from a single center
- Hip stress distribution - Predictor of dislocation in hip arthroplasties. A retrospective study of 149 arthroplasties
- Mortality, morbidity, and cardiac surgery in Injection Drug Use (IDU)-associated versus non-IDU infective endocarditis: The need to expand substance use disorder treatment and harm reduction services
- Pup mortality in New Zealand sea lions (Phocarctos hookeri) at Enderby Island, Auckland Islands, 2013-18
- In vitro endothelial cell migration from limbal edge-modified Quarter-DMEK grafts
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- Prepubertal nutrition alters Leydig cell functional capacity and timing of puberty
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- Mitochondrial alarmins are tissue mediators of ventilator-induced lung injury and ARDS
- Complete Chloroplast Genomes of Vachellia nilotica and Senegalia senegal: Comparative Genomics and Phylogenomic Placement in a New Generic System
- Retraction: Over-Expression of Superoxide Dismutase Ameliorates Cr(VI) Induced Adverse Effects via Modulating Cellular Immune System of Drosophila melanogaster
- Effect of pre-season training phase on anthropometric, hormonal and fitness parameters in young soccer players
- Exosomes from conditioned media of bone marrow-derived mesenchymal stem cells promote bone regeneration by enhancing angiogenesis
- Outcome of patients with heart failure after transcatheter aortic valve implantation
- Fatty acid profile of Romanian’s common bean (Phaseolus vulgaris L.) lipid fractions and their complexation ability by β-cyclodextrin
- Appropriate empirical antibiotic therapy and mortality: Conflicting data explained by residual confounding
- Treatment of corneal endothelial damage in a rabbit model with a bioengineered graft using human decellularized corneal lamina and cultured human corneal endothelium
- Telbivudine on IgG-associated hypergammaglobulinemia and TGF-β1 hyperactivity in hepatitis B virus-related liver cirrhosis
- Correction: Axial variation of deoxyhemoglobin density as a source of the low-frequency time lag structure in blood oxygenation level-dependent signals
- Correction: Mobile health-based physical activity intervention for individuals with spinal cord injury in the community: A pilot study
- Retraction: Placental expression of CD100, CD72 and CD45 is dysregulated in human miscarriage
- Correction: Use of IoT sensing and occupant surveys for determining the resilience of buildings to forest fire generated PM2.5
- Correction: The modulation of facial mimicry by attachment tendencies and their underlying affiliation motives in 3-year-olds: An EMG study
- Correction: Cognitive impairment in multiple sclerosis: An exploratory analysis of environmental and lifestyle risk factors
- Discovering novel disease comorbidities using electronic medical records
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- Epidemiology and antimicrobial resistance of methicillin-resistant Staphylococcus aureus isolates colonizing pigs with different exposure to antibiotics
- Social information use in adolescents: The impact of adults, peers and household composition
- Public practices on antibiotic use: A cross-sectional study among Qatar University students and their family members
- Effects of Topper Training on psychosocial problems, self-esteem, and peer victimisation in Dutch children: A randomised trial
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- A prospective observational study of on-treatment plasma homocysteine levels as a biomarker of toxicity, depression and vitamin supplementation lead-in time pre pemetrexed, in patients with non-small cell lung cancer and malignant mesothelioma
- A strategy to identify protein-N-myristoylation-dependent phosphorylation reactions of cellular proteins by using Phos-tag SDS-PAGE
- Expression profile of sonic hedgehog signaling-related molecules in basal cell carcinoma
- Seasonal alternation of the ontogenetic development of the moon jellyfish Aurelia coerulea in Maizuru Bay, Japan
- Reliability of measurement of active trunk movement in wheelchair basketball players
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- Determining an optimal pool size for testing beef herds for Johne’s disease in Australia
- Correction: Change in larval fish assemblage in a USA east coast estuary estimated from twenty-six years of fixed weekly sampling
- APOE-knockout in rabbits causes loss of cells in nucleus pulposus and enhances the levels of inflammatory catabolic cytokines damaging the intervertebral disc matrix
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- Improved chemotherapy modeling with RAG-based immune deficient mice
- Effect of tracheal antimicrobial peptide on the development of Mannheimia haemolytica pneumonia in cattle
- The internal realities of individuals with type 2 diabetes – a functional framework of self-management practices via Grounded Theory approach
- Role of platelet parameters in early detection and prediction of severity of preeclampsia: A comparative cross-sectional study at Ayder comprehensive specialized and Mekelle general hospitals, Mekelle, Tigray, Ethiopia
- eIF4E and 4EBP1 are prognostic markers of head and neck squamous cell carcinoma recurrence after definitive surgery and adjuvant radiotherapy
- Smoking and other determinants of bone turnover
- Oxygen delivery, oxygen consumption and decreased kidney function after cardiopulmonary bypass
- School engagement of children in early grades: Psychometric, and gender comparisons
- Correction: A review of the elusive bicolored iris Snouted Treefrogs (Anura: Hylidae:Scinax uruguayus group)
- Perceived attractiveness of Czech faces across 10 cultures: Associations with sexual shape dimorphism, averageness, fluctuating asymmetry, and eye color
- Discovery of stable and prognostic CT-based radiomic features independent of contrast administration and dimensionality in oesophageal cancer
- Correction: Population-based dementia prediction model using Korean public health examination data: A cohort study
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- Correction: ISED: Constructing a high-resolution elevation road dataset from massive, low-quality in-situ observations derived from geosocial fitness tracking data
- Correction: Use of validated objective methods of locomotion characteristics and weight distribution for evaluating the efficacy of ketoprofen for alleviating pain in cows with limb pathologies
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- Metabolic costs of spontaneous swimming in Sprattus sprattus L., at different water temperatures
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- Correction: Transcriptome profiling of mouse brain and lung under Dip2a regulation using RNA-sequencing
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- Maximum parsimony interpretation of chromatin capture experiments
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- First evidence of hepatitis E virus infection in a small mammal (yellow-necked mouse) from Croatia
- The inhibitory effects of polypyrrole on the biofilm formation of Streptococcus mutans
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- Upregulation of ERK phosphorylation in rat dorsal root ganglion neurons contributes to oxaliplatin-induced chronic neuropathic pain
- Characterization of the relationship between neutron production and thermal load on a target material in an accelerator-based boron neutron capture therapy system employing a solid-state Li target
- Remote heart rate monitoring - Assessment of the Facereader rPPg by Noldus
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- Effectiveness of steam sterilization of reusable medical devices in primary and secondary care public hospitals in Nepal and factors associated with ineffective sterilization: A nation-wide cross-sectional study
- Relevance of HTLV-1 proviral load in asymptomatic and symptomatic patients living in endemic and non-endemic areas of Argentina
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- Molecular diet analysis of Anguilliformes leptocephalus larvae collected in the western North Pacific
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- Correction: The C-reactive protein/albumin ratio as an independent predictor of mortality in patients with severe sepsis or septic shock treated with early goal-directed therapy
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- Correction: Phylogenetic analysis of hepatitis C virus among HIV/ HCV co-infected patients in Nigeria
- Correction: Relationship between self-disclosure to first acquaintances and subjective well-being in people with schizophrenia spectrum disorders living in the community
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- Correction: An international randomised placebo-controlled trial of a four-component combination pill (“polypill”) in people with raised cardiovascular risk
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- Retraction: Pathological Roles of Interleukin-22 in the Development of Recurrent Hepatitis C after Liver Transplantation
- Correction: Elevational Distribution and Ecology of Small Mammals on Tanzania's Second Highest Mountain
- Correction: Decreased breast cancer-specific mortality risk in patients with a history of thyroid cancer
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