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Highly Efficient Protein Misfolding Cyclic Amplification
Protein misfolding cyclic amplification (PMCA) provides faithful replication of mammalian prions in vitro and has numerous applications in prion research. However, the low efficiency of conversion of PrPC into PrPSc in PMCA limits the applicability of PMCA for many uses including structural studies of infectious prions. It also implies that only a small sub-fraction of PrPC may be available for conversion. Here we show that the yield, rate, and robustness of prion conversion and the sensitivity of prion detection are significantly improved by a simple modification of the PMCA format. Conducting PMCA reactions in the presence of Teflon beads (PMCAb) increased the conversion of PrPC into PrPSc from ∼10% to up to 100%. In PMCAb, a single 24-hour round consistently amplified PrPSc by 600-700-fold. Furthermore, the sensitivity of prion detection in one round (24 hours) increased by 2-3 orders of magnitude. Using serial PMCAb, a 1012-fold dilution of scrapie brain material could be amplified to the level detectible by Western blotting in 3 rounds (72 hours). The improvements in amplification efficiency were observed for the commonly used hamster 263K strain and for the synthetic strain SSLOW that otherwise amplifies poorly in PMCA. The increase in the amplification efficiency did not come at the expense of prion replication specificity. The current study demonstrates that poor conversion efficiencies observed previously have not been due to the scarcity of a sub-fraction of PrPC susceptible to conversion nor due to limited concentrations of essential cellular cofactors required for conversion. The new PMCAb format offers immediate practical benefits and opens new avenues for developing fast ultrasensitive assays and for producing abundant quantities of PrPSc in vitro.
Vyšlo v časopise: Highly Efficient Protein Misfolding Cyclic Amplification. PLoS Pathog 7(2): e32767. doi:10.1371/journal.ppat.1001277
Kategorie: Research Article
prolekare.web.journal.doi_sk: https://doi.org/10.1371/journal.ppat.1001277Souhrn
Protein misfolding cyclic amplification (PMCA) provides faithful replication of mammalian prions in vitro and has numerous applications in prion research. However, the low efficiency of conversion of PrPC into PrPSc in PMCA limits the applicability of PMCA for many uses including structural studies of infectious prions. It also implies that only a small sub-fraction of PrPC may be available for conversion. Here we show that the yield, rate, and robustness of prion conversion and the sensitivity of prion detection are significantly improved by a simple modification of the PMCA format. Conducting PMCA reactions in the presence of Teflon beads (PMCAb) increased the conversion of PrPC into PrPSc from ∼10% to up to 100%. In PMCAb, a single 24-hour round consistently amplified PrPSc by 600-700-fold. Furthermore, the sensitivity of prion detection in one round (24 hours) increased by 2-3 orders of magnitude. Using serial PMCAb, a 1012-fold dilution of scrapie brain material could be amplified to the level detectible by Western blotting in 3 rounds (72 hours). The improvements in amplification efficiency were observed for the commonly used hamster 263K strain and for the synthetic strain SSLOW that otherwise amplifies poorly in PMCA. The increase in the amplification efficiency did not come at the expense of prion replication specificity. The current study demonstrates that poor conversion efficiencies observed previously have not been due to the scarcity of a sub-fraction of PrPC susceptible to conversion nor due to limited concentrations of essential cellular cofactors required for conversion. The new PMCAb format offers immediate practical benefits and opens new avenues for developing fast ultrasensitive assays and for producing abundant quantities of PrPSc in vitro.
Zdroje
1. SaborioGP
PermanneB
SotoC
2001 Sensitive detection of pathological prion protein by cyclic amplification of protein misfolding. Nature 411 810 813
2. SaaP
CastillaJ
SotoC
2006 Ultra-efficient Replication of Infectious Prions by Automated Protein Misfolding Cyclic Amplification. J Biol Chem 281 35245 35252
3. Gonzalez-RomeroD
BarriaMA
LeonP
MoralesR
SotoC
2008 Detection of infectious prions in urine. FEBS Lett 582 3161 3166
4. MurayamaY
YoshiokaM
OkadaH
TakataM
TokashiY
2007 Urinary excretion and blood level of prions in scrapie-infected hamsters. J Gen Virol 88 2890 2898
5. ShikiyaRA
AyersJI
SchuttCR
KincaidAE
BartzJC
2010 Coinfecting prion strains compete for a limiting cellular resource. J Virol 84 5706 5714
6. SaaP
CastillaJ
SotoC
2006 Presymptomatic Detection of Prions in Blood. Science 313 92 94
7. TattumMH
JonesS
PalS
CollingeJ
JacksonGS
2010 Discrimination between prion-infected and normal blood samples by protein misfolding cyclic amplification. Transfusion 50 996 1002
8. HaleyNJ
MathiasonCK
ZabelMD
TellingGC
HooverEA
2009 Detection of sub-clinical CWD infection in conventional test-negative deer long after oral exposure to urine and feces from CWD+ deer. Plos ONE 4 e7990
9. BarriaMA
MukherjeeA
Gonzalez-RomeroD
MoralesR
SotoC
2009 De Novo Generation of Infectious Prions In Vitro Produces a New Disease Phenotype. PLOS Pathog 5 e1000421
10. DeleaultNR
HarrisBT
ReesJR
SupattaponeS
2007 Formation of native prions from minimal components in vitro. Proc Acad Natl Sci U S A 104 9741 9746
11. WangF
WangX
YuanC-G
MaJ
2010 Generating a Prion Bacterially Expressed Recombinant Prion Protein. Science 327 1132 1135
12. DeleaultNR
GeogheganJC
NishinaK
KascsakR
WilliamsonRA
2005 Protease-resistant Prion Protein Amplification Reconstituted with Partially Purified substrates and Synthetic Polyanions. J Biol Chem 280 26873 26879
13. DeleaultNR
KascsakR
GeogheganJC
SupattaponeS
2010 Species-dependent differences in cofactor utilization for formation of the protease-resistant prion protein in vitro. Biochemistry 49 3928 3934
14. DeleaultNR
LucassenRW
SupattaponeS
2003 RNA molecules stimulate prion protein conversion. Nature 425 717 720
15. MaysCE
RyouC
2010 Plasminogen stimulates propagation of protease-resistant prion protein in vitro. Faseb J in press
16. NishinaK
DeleaultNR
MahalS
BaskakovI
LuhrsT
2006 The Stoichiometry of Host PrPC Glycoforms Modulates the Efficiency of PrPSc formation in vitro. Biochemistry 45 14129 14139
17. CastillaJ
Gonzalez-RomeroD
SaaP
MoralesR
De CastroJ
2008 Crossing the Species Barrier by PrPSc Replication In Vitro Generates Unique Infectious Prions. Cell 134 757 768
18. GreenKM
CastillaJ
SewardTS
NapierDL
JewellJE
2008 Accelerated High Fidelity Prion Amplification Within and Across Prion Species Barriers. PLOS Pathog 4 e1000139
19. MeyerettC
MichelB
PulfordB
SparkerTR
NicholsTA
2008 In vitro strain adaptation of CWD prions by serial protein misfolding cyclic amplification. Virology 382 267 276
20. MaysCE
TitlowW
SewardT
TellingGC
RyouC
2009 Enhancement of protein misfolding cyclic amplification by using concentrated cellular prion protein source. Biochem Biophys Res Commun 388 306 310
21. KurtTD
PerrottMR
WiluszCJ
WiluszJ
SupattaponeS
2007 Efficient in vitro amplification of chronic wasting disease PrP-res. J Virol 81 9605 9608
22. BocharovaOV
BreydoL
ParfenovAS
SalnikovVV
BaskakovIV
2005 In vitro conversion of full length mammalian prion protein produces amyloid form with physical property of PrPSc. J Mol Biol 346 645 659
23. GregoriL
LambertBC
GurgelPV
GheorghiuL
EdwardsonP
2006 Reduction of transmissible spongiform encephalopathy infectivity from human red blood cells with prion protein affinity ligands. Transfusion 46 1152 1161
24. GregoriL
McCombieN
PalmerD
BirchP
Sowemimo-CokerSO
2004 Effectiveness of leucoreduction for removal of infectivity of transmissible spongiform encephalopathies from blood. Lancet 364 529 531
25. MakaravaN
KovacsGG
BocharovaOV
SavtchenkoR
AlexeevaI
2010 Recombinant prion protein induces a new transmissible prion disease in wild type animals. Acta Neuropathol 119 177 187
26. SunY
MakaravaN
LeeCI
LaksanalamaiP
RobbFT
2008 Conformational stability of PrP amyloid firbils controls their smallest possible fragment size. J Mol Biol 376 1155 1167
27. BreydoL
BocharovaOV
MakaravaN
SalnikovVV
AndersonM
2005 Methionine Oxidation Interferes with Conversion of the Prion Protein into the Fibrillar Proteinase K-Resistant Conformation. Biochemistry 44 15534 15543
28. OstapchenkoVG
MakaravaN
SavtchenkoR
BaskakovIV
2008 The polybasic N-terminal region of the prion protein controls the physical properties of both the cellular and fibrillar forms of PrP. J Mol Biol 383 1210 1224
29. CastillaJ
SaaP
HetzC
SotoC
2005 In vitro generation of infectious scrapie prions. Cell 121 195 206
30. KramerML
BartzJC
2009 Rapid, high-throughput detection of PrPSc by 96-well immunoassay. Prion 3 44 48
31. MakaravaN
BaskakovIV
2008 The same primary structure of the prion protein yields two distinct self-propagating states. J Biol Chem 283 15988 15996
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