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Response to “Ribosome Rescue and Translation Termination at Non-standard Stop Codons by ICT1 in Mammalian Mitochondria”

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Vyšlo v časopise: Response to “Ribosome Rescue and Translation Termination at Non-standard Stop Codons by ICT1 in Mammalian Mitochondria”. PLoS Genet 11(6): e32767. doi:10.1371/journal.pgen.1005227
Kategorie: Formal Comment
prolekare.web.journal.doi_sk: https://doi.org/10.1371/journal.pgen.1005227

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Zdroje

1. Akabane S, Ueda T, Nierhaus KH, and Takeuchi N, (2014) Ribosome Rescue and Translation Termination at Non-Standard Stop Codons by ICT1 in Mammalian Mitochondria. PLoS genetics 10(9): e1004616. doi: 10.1371/journal.pgen.1004616 25233460

2. Temperley R, Richter R, Dennerlein S, Lightowlers RN, and Chrzanowska-Lightowlers ZM, (2010) Hungry codons promote frameshifting in human mitochondrial ribosomes. Science 327(5963): 301. doi: 10.1126/science.1180674 20075246

3. Greber BJ, Boehringer D, Leitner A, Bieri P, Voigts-Hoffmann F, et al., (2014) Architecture of the large subunit of the mammalian mitochondrial ribosome. Nature 505(7484): 515–519. doi: 10.1038/nature12890 24362565

4. Greber BJ, Boehringer D, Leibundgut M, Bieri P, Leitner A, et al., (2014) The complete structure of the large subunit of the mammalian mitochondrial ribosome. Nature.

5. Brown A, Amunts A, Bai XC, Sugimoto Y, Edwards PC, et al., (2014) Structure of the large ribosomal subunit from human mitochondria. Science.

6. Frolova LY, Tsivkovskii RY, Sivolobova GF, Oparina NY, Serpinsky OI, et al., (1999) Mutations in the highly conserved GGQ motif of class 1 polypeptide release factors abolish ability of human eRF1 to trigger peptidyl-tRNA hydrolysis. RNA 5(8): 1014–1020. 10445876

7. Scarlett DJ, McCaughan KK, Wilson DN, and Tate WP, (2003) Mapping functionally important motifs SPF and GGQ of the decoding release factor RF2 to the Escherichia coli ribosome by hydroxyl radical footprinting. Implications for macromolecular mimicry and structural changes in RF2. J.Biol Chem 278((17)): 15095–15104. 12458201

8. Seit-Nebi A, Frolova L, Justesen J, and Kisselev L, (2001) Class-1 translation termination factors: invariant GGQ minidomain is essential for release activity and ribosome binding but not for stop codon recognition. Nucleic Acids Res 29(19): 3982–3987. 11574680

9. Soleimanpour-Lichaei HR, Kuhl I, Gaisne M, Passos JF, Wydro M, et al., (2007) mtRF1a is a human mitochondrial translation release factor decoding the major termination codons UAA and UAG. Molecular Cell 27(5): 745–757. 17803939

10. Richter R, Rorbach J, Pajak A, Smith PM, Wessels HJ, et al., (2010) A functional peptidyl-tRNA hydrolase, ICT1, has been recruited into the human mitochondrial ribosome. EMBO J 29(6): 1116–1125. doi: 10.1038/emboj.2010.14 20186120

11. Young DJ, Edgar CD, Murphy J, Fredebohm J, Poole ES, et al., (2010) Bioinformatic, structural, and functional analyses support release factor-like MTRF1 as a protein able to decode nonstandard stop codons beginning with adenine in vertebrate mitochondria. RNA 16(6): 1146–1155. doi: 10.1261/rna.1970310 20421313

12. Lind C, Sund J, and Aqvist J, (2013) Codon-reading specificities of mitochondrial release factors and translation termination at non-standard stop codons. Nature communications 4(2940. doi: 10.1038/ncomms3940 24352605

13. Huynen MA, Duarte I, Chrzanowska-Lightowlers ZM, and Nabuurs SB, (2012) Structure based hypothesis of a mitochondrial ribosome rescue mechanism. Biology direct 7(14. doi: 10.1186/1745-6150-7-14 22569235

14. Bibb M, Van Etten RA, Wright CT, Walberg MW, and Clayton DA, (1981) Sequence and Gene Organisation of Mouse Mitochondrial DNA. Cell 26(167–180. 7332926

15. Gadaleta G, Pepe G, De Candia G, Quagliariello C, Sbisà E, et al., (1989) The Complete Nucleotide Sequence of the Rattus novegicus Mitochondrial Genome: Cryptic Signals Revealed by Comparative Analysis between Vertebrates. J. Mol. Evol. 28(497–516. 2504926

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PLOS Genetics

2015 Číslo 6
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