-
Články
- Časopisy
- Kurzy
- Témy
- Kongresy
- Videa
- Podcasty
Loss of Trabid, a New Negative Regulator of the Immune-Deficiency Pathway at the Level of TAK1, Reduces Life Span
A relatively unexplored nexus in Drosophila Immune deficiency (IMD) pathway is TGF-beta Activating Kinase 1 (TAK1), which triggers both immunity and apoptosis. In a cell culture screen, we identified that Lysine at position 142 was a K63-linked Ubiquitin acceptor site for TAK1, required for signalling. Moreover, Lysine at position 156 functioned as a K48-linked Ubiquitin acceptor site, also necessary for TAK1 activity. The deubiquitinase Trabid interacted with TAK1, reducing immune signalling output and K63-linked ubiquitination. The three tandem Npl4 Zinc Fingers and the catalytic Cysteine at position 518 were required for Trabid activity. Flies deficient for Trabid had a reduced life span due to chronic activation of IMD both systemically as well as in their gut where homeostasis was disrupted. The TAK1-associated Binding Protein 2 (TAB2) was linked with the TAK1-Trabid interaction through its Zinc finger domain that pacified the TAK1 signal. These results indicate an elaborate and multi-tiered mechanism for regulating TAK1 activity and modulating its immune signal.
Vyšlo v časopise: Loss of Trabid, a New Negative Regulator of the Immune-Deficiency Pathway at the Level of TAK1, Reduces Life Span. PLoS Genet 10(2): e32767. doi:10.1371/journal.pgen.1004117
Kategorie: Research Article
prolekare.web.journal.doi_sk: https://doi.org/10.1371/journal.pgen.1004117Souhrn
A relatively unexplored nexus in Drosophila Immune deficiency (IMD) pathway is TGF-beta Activating Kinase 1 (TAK1), which triggers both immunity and apoptosis. In a cell culture screen, we identified that Lysine at position 142 was a K63-linked Ubiquitin acceptor site for TAK1, required for signalling. Moreover, Lysine at position 156 functioned as a K48-linked Ubiquitin acceptor site, also necessary for TAK1 activity. The deubiquitinase Trabid interacted with TAK1, reducing immune signalling output and K63-linked ubiquitination. The three tandem Npl4 Zinc Fingers and the catalytic Cysteine at position 518 were required for Trabid activity. Flies deficient for Trabid had a reduced life span due to chronic activation of IMD both systemically as well as in their gut where homeostasis was disrupted. The TAK1-associated Binding Protein 2 (TAB2) was linked with the TAK1-Trabid interaction through its Zinc finger domain that pacified the TAK1 signal. These results indicate an elaborate and multi-tiered mechanism for regulating TAK1 activity and modulating its immune signal.
Zdroje
1. HoellerD, DikicI (2009) Targeting the ubiquitin system in cancer therapy. Nature 458 : 438–444.
2. KomanderD (2009) The emerging complexity of protein ubiquitination. Biochem Soc Trans 37 : 937–953.
3. ChenJ, Chen ZJ (2013) Regulation of NF-κB by ubiquitination. Curr Op Immunol 25 (1) 4–12.
4. KounatidisI, LigoxygakisP (2012) Drosophila as a model system to unravel the layers of innate immunity to infection. Open Biology 2 : 120075.
5. KanekoT, YanoT, AggarwalK, LimJH, UedaK, et al. (2006) PGRP-LC and PGRP-LE have essential yet distinct func - tions in the drosophila immune response to monomeric DAP-type peptidoglycan. Nat Immunol 7 : 715–723.
6. GeorgelP, NaitzaS, KapplerC, FerrandonD, ZacharyD, et al. (2001) Drosophila immune deficiency (IMD) is a death domain protein that activates antibacterial defense and can promote apoptosis. Dev Cell 1 : 503–514.
7. LeulierF, VidalS, SaigoK, UedaR, LemaitreB (2002) Inducible expression of double-stranded RNA reveals a role for dFADD in the regulation of the antibacterial response in Drosophila adults. Curr Biol 12 : 996–1000.
8. NaitzaS, RosséC, KapplerC, GeorgelP, BelvinM, et al. (2002) The Drosophila immune defense against gram-negative infection requires the death protein dFADD. Immunity 17 : 575–81.
9. LeulierF, RodriguezA, KhushRS, AbramsJM, LemaitreB (2000) The Drosophila caspase Dredd is required to resist gram-negative bacterial infection. EMBO Rep 1 : 353–358.
10. MeinanderA, RunchelC, TenevT, ChenL, KimC-H, et al. (2012) Ubiquitylation of the initiator caspase DREDD is required for innate immune signalling. EMBO J 31 : 2770–83.
11. PaquetteN, BroemerM, AggarwalK, ChenL, HussonM, et al. (2010) Caspase-mediated cleavage, IAP binding, and ubiquitination: linking three mechanisms crucial for Drosophila NF-kappaB signaling. Mol Cell 37 : 172–82.
12. VidalS, KhushRS, LeulierF, TzouP, NakamuraM, et al. (2001) Mutations in the Drosophila dTAK1 gene reveal a conserved function for MAPKKKs in the control of rel/NF-kappaB-dependent innate immune responses. Genes & Dev 15 : 1900–1912.
13. KleinoA, ValanneS, UlvilaJ, KallioJ, MyllymakiH, et al. (2005) Inhibitor of apoptosis 2 and TAK1-binding protein are components of the Drosophila Imd pathway. EMBO J 24 : 3423–3434.
14. SilvermanN, ZhouR, ErlichRL, HunterM, BernsteinE, et al. (2003) Immune Activation of NF-κB and JNK Requires Drosophila TAK1. J Biol Chem 278 : 48928–48934.
15. Erturk-HasdemirD, BroemerM, LeulierF, LaneWS, PaquetteN, et al. (2009) Two roles for the Drosophila IKK complex in the activation of Relish and the induction of antimicrobial peptide genes. Proc Natl Acad Sci USA 106 : 9779–9784.
16. StovenS, AndoI, KadalayilL, EngstromY, HultmarkD (2000) Activation of the Drosophila NF-kappaB factor Relish by rapid endoproteolytic cleavage. EMBO Rep 1 : 347–352.
17. LemaitreB, ReichhartJ-M, HoffmannJA (1997) Drosophila host defense: Differential induction of antimicrobial peptide genes after infection by various classes of microorganisms. Proc Natl Acad Sci USA 94 : 14614–14619.
18. ParedesJC, WelchmanDP, PoidevinM (2011) LemaitreB (2011) Negative regulation by amidase PGRPs shapes the Drosophila antibacterial response and protects the fly from innocuous infection. Immunity 35 : 770–9.
19. KleinoA, MyllymäkiH, KallioJ, Vanha-ahoL-M, OksanenK, et al. (2008) Pirk is a negative regulator of the Drosophila Imd pathway. J Immunol 180 : 5413–22.
20. AggarwalK, RusF, Vriesema-MagnusonC, Ertürk-HasdemirD, PaquetteN, et al. (2008) Rudra interrupts receptor signalling complexes to negatively regulate the IMD pathway. PLoS Path 4: e1000120.
21. LhocineN, RibeiroPS, BuchonN, WepfA, WilsonR, et al. (2008) PIMS modulates immune tolerance by negatively regulating Drosophila innate immune signaling. Cell Host Microbe 4 : 147–58.
22. ThevenonD, EngelE, Avet-RochexA, GottarM, BergeretE, et al. (2009) The Drosophila ubiquitin-specific protease dUSP36/Scny targets IMD to prevent constitutive immune signaling. Cell Host Microbe 6 : 309–20.
23. TsichritzisT, GaentzschPC, KosmidisS, BrownAE, SkoulakisEM, et al. (2007) A Drosophila ortholog of the human cylindromatosis tumor suppressor gene regulates triglyceride content and antibacterial defence. Development 134 : 2605–2614.
24. ParkJM, BradyH, RuoccoMG, SunH, WilliamsD, et al. (2004) Targeting of TAK1 by the NF-kappa B protein Relish regulates the JNK-mediated immune response in Drosophila. Genes Dev 18 : 584–594.
25. ZhouR, SilvermanN, HongM, LiaoDS, ChungY, et al. (2005) The role of ubiquitination in Drosophila innate immu - nity. J Biol Chem 280 : 34048–34055.
26. FanY, YuY, ShiY, SunW, XieM, et al. (2010) Lysine 63-linked Polyubiquitination of TAK1 at Lysine 158 Is Required for Tumor Necrosis Factor (alpha) - and Interleukin-1(beta)-induced IKK/NF-kappaB and JNK/AP-1 Activation. J Biol Chem 285 : 5347–5360.
27. FanY, YuY, MaoR, ZhangH, YangJ (2011) TAK1 Lys-158 but not Lys-209 is required for IL-1[beta]-induced Lys63-linked TAK1 polyubiquitination and IKK/NF-κB activation. Cell Signalling 23 : 660–665.27.
28. HeyninckK, BeyaertR (1999) The cytokine-inducible zinc finger protein A20 inhibits IL-1-induced NF-κB activation at the level of TRAF6. FEBS Letters 442 : 147–150.
29. VereeckeL, BeyaertR, van LooG (2009) The ubiquitin-editing enzyme A20 (TNFAIP3) is a central regulator of immunopathology. Trends Immunol 30 : 383–391.
30. TranH, HamadaF, Schwarz-RomondT, BienzM (2008) Trabid, a new positive regulator of Wnt-induced transcription with preference for binding and cleaving K63-linked ubiquitin chains. Genes Dev 22 : 528–542.
31. BellenHJ, LevisRW, LiaoG, HeY, CarlsonJW, et al. (2004) The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. Genetics 167 : 761–781.
32. DantoftW, DavisMM, LindvallJM, TangX, UvellA, et al. (2013) The Oct1 homolog Nubbin is a repressor of NF-κB-dependent immune gene expression that increases the tolerance to gut microbiota. BMC Biol 11 : 99–118.
33. BuchonN, BroderickNA, ChakrabartiS, LemaitreB (2009) Invasive and indigenous microbiota impact intestinal stem cell activity through multiple pathways in Drosophila. Genes Dev 23 : 2333–44.
34. JiangH, PatelPH, KohmaierA, GrenleyMO, McEwenDG, et al. (2009) Cytokine/Jak/Stat signaling mediates regeneration and homeostasis in the Drosophila midgut. Cell 137 : 1343–55.
35. ZhouF, RasmussenA, LeeS, AgaisseH (2013) The UPD3 cytokine couples environmental challenge and intestinal stem cell division through modulation of JAK/STAT signaling in the stem cell microenvironment. Dev Biol 373 : 383–93.
36. BalakirevMY, TcherniukSO, JaquinodM, ChroboczekJ (2003) Otubains: a new family of cysteine proteases in the ubiquitin pathway. EMBO Rep 4 : 517–522.
37. TsudaM, LangmannC, HardenN (2005) AigakiT (2005) The RING-finger scaffold protein Plenty of SH3s targets TAK1 to control immunity signalling in Drosophila. EMBO Rep 6 : 1082–7.
38. LiangL, FanY, ChengJ, ChengD, ZhaoY, et al. (2013) TAK1 ubiquitination regulates doxorubicin-induced NF-κB activation. Cell Signalling 25 : 247–54.
39. FanY, ShiY, LiuS, MaoR, AnL, et al. (2012) Lys48-linked TAK1 polyubiquitination at lysine-72 down-regulates TNFα-induced NF-κB activation via mediating TAK1 degradation,. Cell Signalling 24 : 1381–1389.
40. IshitaniT, TakaesuG, Ninomiya-TsujiJ, ShibuyaH, GaynorRB, et al. (2003) Role of the TAB2-related protein TAB3 in IL-1 and TNF signaling. EMBO J 22 : 6277–6288.
41. BesseA, LamotheB, CamposAD, WebsterWK, MaddineniU, et al. (2007) TAK1-dependent Signaling Requires Functional Interaction with TAB2/TAB3. J Biol Chem 282 : 3918–3928.
42. KanayamaA, SethRB, SunL, EaC-K, HongM, et al. (2004) TAB2 and TAB3 Activate the NF-[kappa]B Pathway through Binding to Polyubiquitin Chains. Mol Cell 15 : 535–548.
43. DelaneyJ, StovenS, UvellH, AndersonK, EngstromY, et al. (2006) Cooperative control of Drosophila immune responses by the JNK and NF-kappaB signalling pathways. EMBO J 25 : 3068–3077.
44. LiuS, ChenZJ (2011) Expanding role of ubiquitination in NF-κB signaling. Cell Res 21 : 6–21.
45. CarterRS, PenningtonKN, ArrateP, OltzEM, BallardDW (2005) Site-specific Monoubiquitination of I-kappa-B Kinase IKK-beta Regulates Its Phosphorylation and Persistent Activation. J Biol Chem 280 : 43272–43279.
46. BonnayF, Cohen-BerrosE, HoffmannM, KimSY, BoulianneGL, et al. (2013) big bang gene modulates gut immune tolerance in Drosophila. Proc Natl Acad Sci USA 110 : 2957–296.
47. HarhajEW, DixitVM (2012) Regulation of NF-kB by deubiquitinases. Immunol Rev 246 : 107–124.
48. ShinSC, KimSH, YouH, KimB, KimAC, et al. (2011) Drosophila microbiome modulates host developmental and metabolic homeostasis via insulin signalling. Science 6056 : 670–4.
49. GlittenbergMT, SilasS, MacCallumDM, GowNA, LigoxygakisP (2011) Wild-type Drosophila melanogaster as an alternative model system for investigating the pathogenicity of Candida albicans. Dis Model Mech 4 : 504–14.
Štítky
Genetika Reprodukčná medicína
Článek Natural Polymorphisms in Influence Negative Selection and CD4∶CD8 Lineage Commitment in the RatČlánek MicroRNAs Located in the Hox Gene Clusters Are Implicated in Huntington's Disease PathogenesisČlánek Comparative RNAi Screens in and Reveal the Impact of Developmental System Drift on Gene FunctionČlánek Mutation of SLC35D3 Causes Metabolic Syndrome by Impairing Dopamine Signaling in Striatal D1 Neurons
Článok vyšiel v časopisePLOS Genetics
Najčítanejšie tento týždeň
2014 Číslo 2- Gynekologové a odborníci na reprodukční medicínu se sejdou na prvním virtuálním summitu
- Je „freeze-all“ pro všechny? Odborníci na fertilitu diskutovali na virtuálním summitu
-
Všetky články tohto čísla
- Fifteen Years Later: Hard and Soft Selection Sweeps Confirm a Large Population Number for HIV In Vivo
- The Same but Different: Worms Reveal the Pervasiveness of Developmental System Drift
- Serine Carboxypeptidase SCPEP1 and Cathepsin A Play Complementary Roles in Regulation of Vasoconstriction via Inactivation of Endothelin-1
- Coherent Functional Modules Improve Transcription Factor Target Identification, Cooperativity Prediction, and Disease Association
- A Long-Chain Flavodoxin Protects from Oxidative Stress and Host Bacterial Clearance
- Mammalian E-type Cyclins Control Chromosome Pairing, Telomere Stability and CDK2 Localization in Male Meiosis
- Influenza Virus Drug Resistance: A Time-Sampled Population Genetics Perspective
- Transcriptome-Wide Analyses of 5′-Ends in RNase J Mutants of a Gram-Positive Pathogen Reveal a Role in RNA Maturation, Regulation and Degradation
- Selective Disruption of Aurora C Kinase Reveals Distinct Functions from Aurora B Kinase during Meiosis in Mouse Oocytes
- X Chromosome Control of Meiotic Chromosome Synapsis in Mouse Inter-Subspecific Hybrids
- A Cohesin-Independent Role for NIPBL at Promoters Provides Insights in CdLS
- Extreme Population Differences in the Human Zinc Transporter ZIP4 (SLC39A4) Are Explained by Positive Selection in Sub-Saharan Africa
- Classic Selective Sweeps Revealed by Massive Sequencing in Cattle
- Genomic Networks of Hybrid Sterility
- Natural Polymorphisms in Influence Negative Selection and CD4∶CD8 Lineage Commitment in the Rat
- Oxidative Stress Is Not a Major Contributor to Somatic Mitochondrial DNA Mutations
- Molecular Identification of Collagen 17a1 as a Major Genetic Modifier of Laminin Gamma 2 Mutation-Induced Junctional Epidermolysis Bullosa in Mice
- Uncoupling of Molecular Maturation from Peripheral Target Innervation in Nociceptors Expressing a Chimeric TrkA/TrkC Receptor
- MicroRNAs Located in the Hox Gene Clusters Are Implicated in Huntington's Disease Pathogenesis
- Loss of Trabid, a New Negative Regulator of the Immune-Deficiency Pathway at the Level of TAK1, Reduces Life Span
- Targeted Ablation of Nesprin 1 and Nesprin 2 from Murine Myocardium Results in Cardiomyopathy, Altered Nuclear Morphology and Inhibition of the Biomechanical Gene Response
- Identification of Novel Genetic Loci Associated with Thyroid Peroxidase Antibodies and Clinical Thyroid Disease
- CEP-1, the p53 Homolog, Mediates Opposing Longevity Outcomes in Mitochondrial Electron Transport Chain Mutants
- Transcriptomics and Functional Genomics of ROS-Induced Cell Death Regulation by
- Quantitative Genome-Wide Genetic Interaction Screens Reveal Global Epistatic Relationships of Protein Complexes in
- Cascades of Genetic Instability Resulting from Compromised Break-Induced Replication
- Serine- and Threonine/Valine-Dependent Activation of PDK and Tor Orthologs Converge on Sch9 to Promote Aging
- Zfp322a Regulates Mouse ES Cell Pluripotency and Enhances Reprogramming Efficiency
- Insertional Mutagenesis and Deep Profiling Reveals Gene Hierarchies and a -Dependent Bottleneck in Lymphomagenesis
- DAAM Is Required for Thin Filament Formation and Sarcomerogenesis during Muscle Development in Drosophila
- Plasma Cholesterol–Induced Lesion Networks Activated before Regression of Early, Mature, and Advanced Atherosclerosis
- High-Resolution Profiling of Stationary-Phase Survival Reveals Yeast Longevity Factors and Their Genetic Interactions
- Comparative RNAi Screens in and Reveal the Impact of Developmental System Drift on Gene Function
- Accurate and Robust Genomic Prediction of Celiac Disease Using Statistical Learning
- Sex-Specific Embryonic Gene Expression in Species with Newly Evolved Sex Chromosomes
- Chromosome X-Wide Association Study Identifies Loci for Fasting Insulin and Height and Evidence for Incomplete Dosage Compensation
- Negative Feedback and Transcriptional Overshooting in a Regulatory Network for Horizontal Gene Transfer
- DNA Sequence Explains Seemingly Disordered Methylation Levels in Partially Methylated Domains of Mammalian Genomes
- Insights into the Genomic Landscape: Comparative Genomics Reveals Variations in Ploidy and Nutrient Utilisation Potential amongst Wine Isolates
- Molecular Evidence for the Inverse Comorbidity between Central Nervous System Disorders and Cancers Detected by Transcriptomic Meta-analyses
- The Centriolar Satellite Protein AZI1 Interacts with BBS4 and Regulates Ciliary Trafficking of the BBSome
- Fine-Mapping the Region Detects Common Variants Tagging a Rare Coding Allele: Evidence for Synthetic Association in Prostate Cancer
- Transmission Distortion Affecting Human Noncrossover but Not Crossover Recombination: A Hidden Source of Meiotic Drive
- A Variant in the Neuropeptide Receptor is a Major Determinant of Growth and Physiology
- Mutation of SLC35D3 Causes Metabolic Syndrome by Impairing Dopamine Signaling in Striatal D1 Neurons
- NSUN4 Is a Dual Function Mitochondrial Protein Required for Both Methylation of 12S rRNA and Coordination of Mitoribosomal Assembly
- MicroRNA-133 Inhibits Behavioral Aggregation by Controlling Dopamine Synthesis in Locusts
- Convergence of Light and ABA Signaling on the Promoter
- Arf4 Is Required for Mammalian Development but Dispensable for Ciliary Assembly
- Distinct Requirements for Cranial Ectoderm and Mesenchyme-Derived Wnts in Specification and Differentiation of Osteoblast and Dermal Progenitors
- Chk2 and P53 Regulate the Transmission of Healed Chromosomes in the Male Germline
- Ddc2 Mediates Mec1 Activation through a Ddc1- or Dpb11-Independent Mechanism
- Mapping the Fitness Landscape of Gene Expression Uncovers the Cause of Antagonism and Sign Epistasis between Adaptive Mutations
- Euchromatic Transposon Insertions Trigger Production of Novel Pi- and Endo-siRNAs at the Target Sites in the Germline
- miR-100 Induces Epithelial-Mesenchymal Transition but Suppresses Tumorigenesis, Migration and Invasion
- Canine Hereditary Ataxia in Old English Sheepdogs and Gordon Setters Is Associated with a Defect in the Autophagy Gene Encoding
- Within-Host Spatiotemporal Dynamics of Plant Virus Infection at the Cellular Level
- Analysis of Meiosis in SUN1 Deficient Mice Reveals a Distinct Role of SUN2 in Mammalian Meiotic LINC Complex Formation and Function
- Genome-Wide Association Study of Metabolic Traits Reveals Novel Gene-Metabolite-Disease Links
- Mechanistically Distinct Mouse Models for -Associated Retinopathy
- DAF-16/FoxO Directly Regulates an Atypical AMP-Activated Protein Kinase Gamma Isoform to Mediate the Effects of Insulin/IGF-1 Signaling on Aging in
- Chromosome I Controls Chromosome II Replication in
- Integrated Genomic Characterization Reveals Novel, Therapeutically Relevant Drug Targets in FGFR and EGFR Pathways in Sporadic Intrahepatic Cholangiocarcinoma
- The Iodotyrosine Deiodinase Ortholog SUP-18 Functions through a Conserved Channel SC-Box to Regulate the Muscle Two-Pore Domain Potassium Channel SUP-9
- The Genome of Highlights a Fish Pathogen Adapted to Fluctuating Environments
- Distinct DNA Binding Sites Contribute to the TCF Transcriptional Switch in and
- The Streamlined Genome of spp. Relative to Human Pathogenic Kinetoplastids Reveals a Parasite Tailored for Plants
- PLOS Genetics
- Archív čísel
- Aktuálne číslo
- Informácie o časopise
Najčítanejšie v tomto čísle- Genome-Wide Association Study of Metabolic Traits Reveals Novel Gene-Metabolite-Disease Links
- A Cohesin-Independent Role for NIPBL at Promoters Provides Insights in CdLS
- Classic Selective Sweeps Revealed by Massive Sequencing in Cattle
- Arf4 Is Required for Mammalian Development but Dispensable for Ciliary Assembly
Prihlásenie#ADS_BOTTOM_SCRIPTS#Zabudnuté hesloZadajte e-mailovú adresu, s ktorou ste vytvárali účet. Budú Vám na ňu zasielané informácie k nastaveniu nového hesla.
- Časopisy