#PAGE_PARAMS# #ADS_HEAD_SCRIPTS# #MICRODATA#

Common Genetic Determinants of Intraocular Pressure and Primary Open-Angle Glaucoma


Intraocular pressure (IOP) is a highly heritable risk factor for primary open-angle glaucoma and is the only target for current glaucoma therapy. The genetic factors which determine IOP are largely unknown. We performed a genome-wide association study for IOP in 11,972 participants from 4 independent population-based studies in The Netherlands. We replicated our findings in 7,482 participants from 4 additional cohorts from the UK, Australia, Canada, and the Wellcome Trust Case-Control Consortium 2/Blue Mountains Eye Study. IOP was significantly associated with rs11656696, located in GAS7 at 17p13.1 (p = 1.4×10−8), and with rs7555523, located in TMCO1 at 1q24.1 (p = 1.6×10−8). In a meta-analysis of 4 case-control studies (total N = 1,432 glaucoma cases), both variants also showed evidence for association with glaucoma (p = 2.4×10−2 for rs11656696 and p = 9.1×10−4 for rs7555523). GAS7 and TMCO1 are highly expressed in the ciliary body and trabecular meshwork as well as in the lamina cribrosa, optic nerve, and retina. Both genes functionally interact with known glaucoma disease genes. These data suggest that we have identified two clinically relevant genes involved in IOP regulation.


Vyšlo v časopise: Common Genetic Determinants of Intraocular Pressure and Primary Open-Angle Glaucoma. PLoS Genet 8(5): e32767. doi:10.1371/journal.pgen.1002611
Kategorie: Research Article
prolekare.web.journal.doi_sk: https://doi.org/10.1371/journal.pgen.1002611

Souhrn

Intraocular pressure (IOP) is a highly heritable risk factor for primary open-angle glaucoma and is the only target for current glaucoma therapy. The genetic factors which determine IOP are largely unknown. We performed a genome-wide association study for IOP in 11,972 participants from 4 independent population-based studies in The Netherlands. We replicated our findings in 7,482 participants from 4 additional cohorts from the UK, Australia, Canada, and the Wellcome Trust Case-Control Consortium 2/Blue Mountains Eye Study. IOP was significantly associated with rs11656696, located in GAS7 at 17p13.1 (p = 1.4×10−8), and with rs7555523, located in TMCO1 at 1q24.1 (p = 1.6×10−8). In a meta-analysis of 4 case-control studies (total N = 1,432 glaucoma cases), both variants also showed evidence for association with glaucoma (p = 2.4×10−2 for rs11656696 and p = 9.1×10−4 for rs7555523). GAS7 and TMCO1 are highly expressed in the ciliary body and trabecular meshwork as well as in the lamina cribrosa, optic nerve, and retina. Both genes functionally interact with known glaucoma disease genes. These data suggest that we have identified two clinically relevant genes involved in IOP regulation.


Zdroje

1. ResnikoffSPascoliniDEtya'aleDKocurIPararajasegaramR 2004 Global data on visual impairment in the year 2002. Bull World Health Organ 844 851

2. van KoolwijkLMEBunceCViswanathanAC 2009 Genetic Epidemiology. ShaarawyTMSherwoodMBHitchingsRACrowstonJG Glaucoma Saunders Elsevier 277 289

3. MonemiSSpaethGDaSilvaAPopinchalkSIlitchevE 2005 Identification of a novel adult-onset primary open-angle glaucoma (POAG) gene on 5q22.1. Hum Mol Genet 725 733

4. RezaieTChildAHitchingsRBriceGMillerL 2002 Adult-onset primary open-angle glaucoma caused by mutations in optineurin. Science 1077 1079

5. StoneEMFingertJHAlwardWLNguyenTDPolanskyJR 1997 Identification of a gene that causes primary open angle glaucoma. Science 668 670

6. FingertJHHeonELiebmannJMYamamotoTCraigJE 1999 Analysis of myocilin mutations in 1703 glaucoma patients from five different populations. Hum Mol Genet 899 905

7. AlwardWLKwonYHKawaseKCraigJEHayrehSS 2003 Evaluation of optineurin sequence variations in 1,048 patients with open-angle glaucoma. Am J Ophthalmol 904 910

8. HauserMAAllinghamRRLinkroumKWangJLaRocque-AbramsonK 2006 Distribution of WDR36 DNA sequence variants in patients with primary open-angle glaucoma. Invest Ophthalmol Vis Sci 2542 2546

9. ThorleifssonGWaltersGBHewittAWMassonGHelgasonA 2010 Common variants near CAV1 and CAV2 are associated with primary open-angle glaucoma. Nat Genet 906 909

10. NakanoMIkedaYTaniguchiTYagiTFuwaM 2009 Three susceptible loci associated with primary open-angle glaucoma identified by genome-wide association study in a Japanese population. Proc Natl Acad Sci U S A 12838 12842

11. BurdonKPMacgregorSHewittAWSharmaSChidlowG 2011 Genome-wide association study identifies susceptibility loci for open angle glaucoma at TMCO1 and CDKN2B-AS1. Nat Genet 574 578

12. RamdasWDvan KoolwijkLMIkramMKJansoniusNMde JongPT 1998 A genome-wide association study of optic disc parameters. PLoS Genet e1000978 doi:10.1371/journal.pgen.1000978

13. JiaoXYangZYangXChenYTongZ 2009 Common variants on chromosome 2 and risk of primary open-angle glaucoma in the Afro-Caribbean population of Barbados. Proc Natl Acad Sci U S A 17105 17110

14. ColemanALMigliorS 2008 Risk factors for glaucoma onset and progression. Surv Ophthalmol S3 10

15. CarbonaroFAndrewTMackeyDASpectorTDHammondCJ 2008 Heritability of intraocular pressure: a classical twin study. Br J Ophthalmol 1125 1128

16. ChangTCCongdonNGWojciechowskiRMunozBGilbertD 2005 Determinants and heritability of intraocular pressure and cup-to-disc ratio in a defined older population. Ophthalmology 1186 1191

17. KleinBEKleinRLeeKE 2004 Heritability of risk factors for primary open-angle glaucoma: the Beaver Dam Eye Study. Invest Ophthalmol Vis Sci 59 62

18. van KoolwijkLMDesprietDDvan DuijnCMPardo CortesLMVingerlingJR 2007 Genetic contributions to glaucoma: heritability of intraocular pressure, retinal nerve fiber layer thickness, and optic disc morphology. Invest Ophthalmol Vis Sci 3669 3676

19. ZhengYXiangFHuangWHuangGYinQ 2009 Distribution and heritability of intraocular pressure in chinese children: the Guangzhou twin eye study. Invest Ophthalmol Vis Sci 2040 2043

20. CharlesworthJCDyerTDStankovichJMBlangeroJMackeyDA 2005 Linkage to 10q22 for maximum intraocular pressure and 1p32 for maximum cup-to-disc ratio in an extended primary open-angle glaucoma pedigree. Invest Ophthalmol Vis Sci 3723 3729

21. DuggalPKleinAPLeeKEIyengarSKKleinR 2005 A genetic contribution to intraocular pressure: the beaver dam eye study. Invest Ophthalmol Vis Sci 555 560

22. DuggalPKleinAPLeeKEKleinRKleinBE 2007 Identification of novel genetic loci for intraocular pressure: a genomewide scan of the Beaver Dam Eye Study. Arch Ophthalmol 74 79

23. LeeMKWooSJKimJIChoSIKimH 2010 Replication of a glaucoma candidate gene on 5q22.1 for intraocular pressure in mongolian populations: the GENDISCAN Project. Invest Ophthalmol Vis Sci 1335 1340

24. RotimiCNChenGAdeyemoAAJonesLSAgyenim-BoatengK 2006 Genomewide scan and fine mapping of quantitative trait loci for intraocular pressure on 5q and 14q in West Africans. Invest Ophthalmol Vis Sci 3262 3267

25. PangCPFanBJCanlasOWangDYDuboisS 2006 A genome-wide scan maps a novel juvenile-onset primary open angle glaucoma locus to chromosome 5q. Mol Vis 85 92

26. JohnsonADHandsakerREPulitSLNizzariMMO'DonnellCJ 2008 SNAP: a web-based tool for identification and annotation of proxy SNPs using HapMap. Bioinformatics 2938 2939

27. WiggsJLAllinghamRRHossainAKernJAugusteJ 2000 Genome-wide scan for adult onset primary open angle glaucoma. Hum Mol Genet 1109 1117

28. LitonPBLunaCChallaPEpsteinDLGonzalezP 2006 Genome-wide expression profile of human trabecular meshwork cultured cells, nonglaucomatous and primary open angle glaucoma tissue. Mol Vis 774 790

29. CherryTJTrimarchiJMStadlerMBCepkoCL 2009 Development and diversification of retinal amacrine interneurons at single cell resolution. Proc Natl Acad Sci U S A 9495 9500

30. JuYTChangACSheBRTsaurMLHwangHM 1998 gas7: A gene expressed preferentially in growth-arrested fibroblasts and terminally differentiated Purkinje neurons affects neurite formation. Proc Natl Acad Sci U S A 11423 11428

31. SheBRLiouGGLin-ChaoS 2002 Association of the growth-arrest-specific protein Gas7 with F-actin induces reorganization of microfilaments and promotes membrane outgrowth. Exp Cell Res 34 44

32. ChaoCCChangPYLuHH 2005 Human Gas7 isoforms homologous to mouse transcripts differentially induce neurite outgrowth. J Neurosci Res 153 162

33. KogaTShenXParkJSQiuYParkBC 2010 Differential effects of myocilin and optineurin, two glaucoma genes, on neurite outgrowth. Am J Pathol 343 352

34. DijkFBergenAAKamphuisW 2007 GAP-43 expression is upregulated in retinal ganglion cells after ischemia/reperfusion-induced damage. Exp Eye Res 858 867

35. Wentz-HunterKKubotaRShenXYueBY 2004 Extracellular myocilin affects activity of human trabecular meshwork cells. J Cell Physiol 45 52

36. BayerAUFerrariFErbC 2002 High occurrence rate of glaucoma among patients with Alzheimer's disease. Eur Neurol 165 168

37. WangWHMcNattLGPangIHMillarJCHellbergPE 2008 Increased expression of the WNT antagonist sFRP-1 in glaucoma elevates intraocular pressure. J Clin Invest 1056 1064

38. ShyamRShenXYueBYWentz-HunterKK 2010 Wnt gene expression in human trabecular meshwork cells. Mol Vis 122 129

39. RussPKKuppermanAIPresleySHHaseltonFRChangMS 2010 Inhibition of RhoA signaling with increased Bves in trabecular meshwork cells. Invest Ophthalmol Vis Sci 223 230

40. ChangYUengSWLin-ChaoSChaoCC 2008 Involvement of Gas7 along the ERK1/2 MAP kinase and SOX9 pathway in chondrogenesis of human marrow-derived mesenchymal stem cells. Osteoarthritis Cartilage 1403 1412

41. RamdasWDvan KoolwijkLMIkramMKJansoniusNMde JongPT 2010 A genome-wide association study of optic disc parameters. PLoS Genet e1000978 PLoS Genet: e1000978. doi:10.1371/journal.pgen.1000978

42. RobertsonJGolesicEGauldieJWest-MaysJA 2009 Ocular Gene Transfer of Active TGF{beta} Induces Changes in Anterior Segment Morphology and Elevated IOP in Rats. Invest Ophthalmol Vis Sci

43. XinBPuffenbergerEGTurbenSTanHZhouA 2010 Homozygous frameshift mutation in TMCO1 causes a syndrome with craniofacial dysmorphism, skeletal anomalies, and mental retardation. Proc Natl Acad Sci U S A 258 263

44. ZhangZMoDCongPHeZLingF 2010 Molecular cloning, expression patterns and subcellular localization of porcine TMCO1 gene. Mol Biol Rep 1611 1618

45. EhretGBO'ConnorAAWederACooperRSChakravartiA 2009 Follow-up of a major linkage peak on chromosome 1 reveals suggestive QTLs associated with essential hypertension: GenNet study. Eur J Hum Genet 1650 1657

46. KleinBEKleinRKnudtsonMD 2005 Intraocular pressure and systemic blood pressure: longitudinal perspective: the Beaver Dam Eye Study. Br J Ophthalmol 284 287

47. KohlhaasMBoehmAGSpoerlEPurstenAGreinHJ 2006 Effect of central corneal thickness, corneal curvature, and axial length on applanation tonometry. Arch Ophthalmol 471 476

48. GordonMOBeiserJABrandtJDHeuerDKHigginbothamEJ 2002 The Ocular Hypertension Treatment Study: baseline factors that predict the onset of primary open-angle glaucoma. Arch Ophthalmol 714 720

49. ShimmyoMRossAJMoyAMostafaviR 2003 Intraocular pressure, Goldmann applanation tension, corneal thickness, and corneal curvature in Caucasians, Asians, Hispanics, and African Americans. Am J Ophthalmol 603 613

50. GunvantPBaskaranMVijayaLJosephISWatkinsRJ 2004 Effect of corneal parameters on measurements using the pulsatile ocular blood flow tonograph and Goldmann applanation tonometer. Br J Ophthalmol 518 522

51. FosterPJBaasanhuJAlsbirkPHMunkhbayarDUranchimegD 1998 Central corneal thickness and intraocular pressure in a Mongolian population. Ophthalmology 969 973

52. FosterPJMachinDWongTYNgTPKirwanJF 2003 Determinants of intraocular pressure and its association with glaucomatous optic neuropathy in Chinese Singaporeans: the Tanjong Pagar Study. Invest Ophthalmol Vis Sci 3885 3891

53. CharlesworthJKramerPLDyerTDiegoVSamplesJR 2010 The path to open-angle glaucoma gene discovery: endophenotypic status of intraocular pressure, cup-to-disc ratio, and central corneal thickness. Invest Ophthalmol Vis Sci 3509 3514

54. LandersJAHewittAWDimasiDPCharlesworthJCStragaT 2009 Heritability of central corneal thickness in nuclear families. Invest Ophthalmol Vis Sci 4087 4090

55. TohTLiewSHMacKinnonJRHewittAWPoulsenJL 2005 Central corneal thickness is highly heritable: the twin eye studies. Invest Ophthalmol Vis Sci 3718 3722

56. LuYDimasiDPHysiPGHewittAWBurdonKP 2010 Common genetic variants near the Brittle Cornea Syndrome locus ZNF469 influence the blinding disease risk factor central corneal thickness. PLoS Genet e1000947 doi:10.1371/journal.pgen.1000947

57. Newton-ChehCJohnsonTGatevaVTobinMDBochudM 2009 Genome-wide association study identifies eight loci associated with blood pressure. Nat Genet 666 676

58. LevyDEhretGBRiceKVerwoertGCLaunerLJ 2009 Genome-wide association study of blood pressure and hypertension. Nat Genet 677 687

59. van der ValkRWebersCASchoutenJSZeegersMPHendrikseF 2005 Intraocular pressure-lowering effects of all commonly used glaucoma drugs: a meta-analysis of randomized clinical trials. Ophthalmology 1177 1185

60. GabeltBTKaufmanPL 2005 Changes in aqueous humor dynamics with age and glaucoma. Prog Retin Eye Res 612 637

61. 1993 The effect of intensive treatment of diabetes on the development and progression of long-term complications in insulin-dependent diabetes mellitus. The Diabetes Control and Complications Trial Research Group. N Engl J Med 977 986

62. HofmanABretelerMMvan DuijnCMKrestinGPPolsHA 2007 The Rotterdam Study: objectives and design update. Eur J Epidemiol 819 829

63. AulchenkoYSHeutinkPMackayIBertoli-AvellaAMPullenJ 2004 Linkage disequilibrium in young genetically isolated Dutch population. Eur J Hum Genet 527 534

64. DielemansIVingerlingJRHofmanAGrobbeeDEde JongPT 1994 Reliability of intraocular pressure measurement with the Goldmann applanation tonometer in epidemiological studies. Graefes Arch Clin Exp Ophthalmol 141 144

65. AulchenkoYSRipkeSIsaacsAvan DuijnCM 2007 GenABEL: an R library for genome-wide association analysis. Bioinformatics 1294 1296

66. AminNvan DuijnCMAulchenkoYS 2007 A genomic background based method for association analysis in related individuals. PLoS ONE e1274 doi:10.1371/journal.pone.0001274

67. ChenWMAbecasisGR 2007 Family-based association tests for genomewide association scans. Am J Hum Genet 913 926

68. BacanuSADevlinBRoederK 2000 The power of genomic control. Am J Hum Genet 1933 1944

69. HoggartCJClarkTGDeIMWhittakerJCBaldingDJ 2008 Genome-wide significance for dense SNP and resequencing data. Genet Epidemiol 179 185

70. BooijJCvanSSSwagemakersSMEssingAHVerkerkAJ 2009 Functional annotation of the human retinal pigment epithelium transcriptome. BMC Genomics 164

Štítky
Genetika Reprodukčná medicína

Článok vyšiel v časopise

PLOS Genetics


2012 Číslo 5
Najčítanejšie tento týždeň
Najčítanejšie v tomto čísle
Kurzy

Zvýšte si kvalifikáciu online z pohodlia domova

Získaná hemofilie - Povědomí o nemoci a její diagnostika
nový kurz

Eozinofilní granulomatóza s polyangiitidou
Autori: doc. MUDr. Martina Doubková, Ph.D.

Všetky kurzy
Prihlásenie
Zabudnuté heslo

Zadajte e-mailovú adresu, s ktorou ste vytvárali účet. Budú Vám na ňu zasielané informácie k nastaveniu nového hesla.

Prihlásenie

Nemáte účet?  Registrujte sa

#ADS_BOTTOM_SCRIPTS#