-
Články
- Časopisy
- Kurzy
- Témy
- Kongresy
- Videa
- Podcasty
Recurrent Chromosome 16p13.1 Duplications Are a Risk Factor for Aortic Dissections
Chromosomal deletions or reciprocal duplications of the 16p13.1 region have been implicated in a variety of neuropsychiatric disorders such as autism, schizophrenia, epilepsies, and attention-deficit hyperactivity disorder (ADHD). In this study, we investigated the association of recurrent genomic copy number variants (CNVs) with thoracic aortic aneurysms and dissections (TAAD). By using SNP arrays to screen and comparative genomic hybridization microarrays to validate, we identified 16p13.1 duplications in 8 out of 765 patients of European descent with adult-onset TAAD compared with 4 of 4,569 controls matched for ethnicity (P = 5.0×10−5, OR = 12.2). The findings were replicated in an independent cohort of 467 patients of European descent with TAAD (P = 0.005, OR = 14.7). Patients with 16p13.1 duplications were more likely to harbor a second rare CNV (P = 0.012) and to present with aortic dissections (P = 0.010) than patients without duplications. Duplications of 16p13.1 were identified in 2 of 130 patients with familial TAAD, but the duplications did not segregate with TAAD in the families. MYH11, a gene known to predispose to TAAD, lies in the duplicated region of 16p13.1, and increased MYH11 expression was found in aortic tissues from TAAD patients with 16p13.1 duplications compared with control aortas. These data suggest chromosome 16p13.1 duplications confer a risk for TAAD in addition to the established risk for neuropsychiatric disorders. It also indicates that recurrent CNVs may predispose to disorders involving more than one organ system, an observation critical to the understanding of the role of recurrent CNVs in human disease and a finding that may be common to other recurrent CNVs involving multiple genes.
Vyšlo v časopise: Recurrent Chromosome 16p13.1 Duplications Are a Risk Factor for Aortic Dissections. PLoS Genet 7(6): e32767. doi:10.1371/journal.pgen.1002118
Kategorie: Research Article
prolekare.web.journal.doi_sk: https://doi.org/10.1371/journal.pgen.1002118Souhrn
Chromosomal deletions or reciprocal duplications of the 16p13.1 region have been implicated in a variety of neuropsychiatric disorders such as autism, schizophrenia, epilepsies, and attention-deficit hyperactivity disorder (ADHD). In this study, we investigated the association of recurrent genomic copy number variants (CNVs) with thoracic aortic aneurysms and dissections (TAAD). By using SNP arrays to screen and comparative genomic hybridization microarrays to validate, we identified 16p13.1 duplications in 8 out of 765 patients of European descent with adult-onset TAAD compared with 4 of 4,569 controls matched for ethnicity (P = 5.0×10−5, OR = 12.2). The findings were replicated in an independent cohort of 467 patients of European descent with TAAD (P = 0.005, OR = 14.7). Patients with 16p13.1 duplications were more likely to harbor a second rare CNV (P = 0.012) and to present with aortic dissections (P = 0.010) than patients without duplications. Duplications of 16p13.1 were identified in 2 of 130 patients with familial TAAD, but the duplications did not segregate with TAAD in the families. MYH11, a gene known to predispose to TAAD, lies in the duplicated region of 16p13.1, and increased MYH11 expression was found in aortic tissues from TAAD patients with 16p13.1 duplications compared with control aortas. These data suggest chromosome 16p13.1 duplications confer a risk for TAAD in addition to the established risk for neuropsychiatric disorders. It also indicates that recurrent CNVs may predispose to disorders involving more than one organ system, an observation critical to the understanding of the role of recurrent CNVs in human disease and a finding that may be common to other recurrent CNVs involving multiple genes.
Zdroje
1. SharpAJHansenSSelzerRRChengZReganR 2006 Discovery of previously unidentified genomic disorders from the duplication architecture of the human genome. Nat Genet 38 1038 1042
2. JohnsonMEChengZMorrisonVASchererSVenturaM 2006 Recurrent duplication-driven transposition of DNA during hominoid evolution. Proc Natl Acad Sci U S A 103 17626 17631
3. SymmonsOVaradiAAranyiT 2008 How segmental duplications shape our genome: recent evolution of ABCC6 and PKD1 Mendelian disease genes. Mol Biol Evol 25 2601 2613
4. HannesFDSharpAJMeffordHCdeRTRuivenkampCA 2009 Recurrent reciprocal deletions and duplications of 16p13.11: the deletion is a risk factor for MR/MCA while the duplication may be a rare benign variant. J Med Genet 46 223 232
5. UllmannRTurnerGKirchhoffMChenWTongeB 2007 Array CGH identifies reciprocal 16p13.1 duplications and deletions that predispose to autism and/or mental retardation. Hum Mutat 28 674 682
6. GillbergC 1998 Chromosomal disorders and autism. J Autism Dev Disord 28 415 425
7. HebebrandJMartinMKornerJRoitzheimBdeBK 1994 Partial trisomy 16p in an adolescent with autistic disorder and Tourette's syndrome. Am J Med Genet 54 268 270
8. MeffordHCMuhleHOstertagPvonSSBuysseK 2010 Genome-wide copy number variation in epilepsy: novel susceptibility loci in idiopathic generalized and focal epilepsies. PLoS Genet 6 e1000962 doi:10.1371/journal.pgen.1000962
9. IngasonARujescuDCichonSSigurdssonESigmundssonT 2011 Copy number variations of chromosome 16p13.1 region associated with schizophrenia. Mol Psychiatry 16 17 25
10. WilliamsNMZaharievaIMartinALangleyKMantripragadaK 2010 Rare chromosomal deletions and duplications in attention-deficit hyperactivity disorder: a genome-wide analysis. Lancet 376 1401 1408
11. HoyertDLAriasESmithBLMurphySLKochanekKD 2001 Deaths: final data for 1999. Natl Vital Stat Rep 49 1 113
12. HiratzkaLFBakrisGLBeckmanJABersinRMCarrVF 2010 2010 ACCF/AHA/AATS/ACR/ASA/SCA/SCAI/SIR/STS/SVM guidelines for the diagnosis and management of patients with Thoracic Aortic Disease: a report of the American College of Cardiology Foundation/American Heart Association Task Force on Practice Guidelines, American Association for Thoracic Surgery, American College of Radiology, American Stroke Association, Society of Cardiovascular Anesthesiologists, Society for Cardiovascular Angiography and Interventions, Society of Interventional Radiology, Society of Thoracic Surgeons, and Society for Vascular Medicine. Circulation 121 e266 e369
13. BiddingerARocklinMCoselliJMilewiczDM 1997 Familial thoracic aortic dilatations and dissections: a case control study. J Vasc Surg 25 506 511
14. AlbornozGCoadyMARobertsMDaviesRRTranquilliMRizzoJAElefteriadesJA 2006 Familial thoracic aortic aneurysms and dissections–incidence, modes of inheritance, and phenotypic patterns. Ann Thorac Surg 82 1400 1405
15. DietzHCPyeritzRE 1995 Mutations in the human gene for fibrillin-1 (FBN1) in the Marfan syndrome and related disorders. Hum Mol Genet 4 Spec No 1799 1809
16. MilewiczDMGuoDTran-FaduluVLafontAPapkeCInamotoS 2008 Genetic Basis of Thoracic Aortic Aneurysms and Dissections: Focus on Smooth Muscle Cell Contractile Dysfunction. Annu Rev Genomics Hum Genet 9 283 302
17. PannuHFaduluVChangJLafontAHashamSN 2005 Mutations in transforming growth factor-beta receptor type II cause familial thoracic aortic aneurysms and dissections. Circulation 112 513 520
18. ZhuLVranckxRKhau VanKPLalandeABoissetN 2006 Mutations in myosin heavy chain 11 cause a syndrome associating thoracic aortic aneurysm/aortic dissection and patent ductus arteriosus. Nat Genet 38 343 349
19. GuoDCPannuHPapkeCLYuRKAvidanN 2007 Mutations in smooth muscle alpha-actin (ACTA2) lead to thoracic aortic aneurysms and dissections. Nat Genet 39 1488 1493
20. Tran-FaduluVPannuHKimDHVickGWIIILonsfordCM 2009 Analysis of multigenerational families with thoracic aortic aneurysms and dissections due to TGFBR1 or TGFBR2 mutations. J Med Genet 46 607 613
21. WangLGuoDCCaoJGongLKammKE 2010 Mutations in Myosin light chain kinase cause familial aortic dissections. Am J Hum Genet 87 701 707
22. PrakashSKLeMaireSAGuoDCRussellLRegaladoES 2010 Rare copy number variants disrupt genes regulating vascular smooth muscle cell adhesion and contractility in sporadic thoracic aortic aneurysms and dissections. Am J Hum Genet 87 743 756
23. PannuHTran-FaduluVPapkeCLSchererSLiuY 2007 MYH11 mutations result in a distinct vascular pathology driven by insulin-like growth factor 1 and angiotensin II. Hum Mol Genet 16 3453 3462
24. Brunetti-PierriNBergJSScagliaFBelmontJBacinoCA 2008 Recurrent reciprocal 1q21.1 deletions and duplications associated with microcephaly or macrocephaly and developmental and behavioral abnormalities. Nat Genet 40 1466 1471
25. MeffordHCSharpAJBakerCItsaraAJiangZ 2008 Recurrent rearrangements of chromosome 1q21.1 and variable pediatric phenotypes. N Engl J Med 359 1685 1699
26. GirirajanSRosenfeldJACooperGMAntonacciFSiswaraP 2010 A recurrent 16p12.1 microdeletion supports a two-hit model for severe developmental delay. Nat Genet 42 203 209
27. KathiresanSVoightBFPurcellSMusunuruKArdissinoD 2009 Genome-wide association of early-onset myocardial infarction with single nucleotide polymorphisms and copy number variants. Nat Genet 41 334 341
28. MatarinMSimon-SanchezJFungHCScholzSGibbsJR 2008 Structural genomic variation in ischemic stroke. Neurogenetics 9 101 108
29. MartinAFBhattiSPyne-GeithmanGJFarjahMManavesV 2007 Expression and function of COOH-terminal myosin heavy chain isoforms in mouse smooth muscle. Am J Physiol Cell Physiol 293 C238 45
30. LandsverkMLLiSHutagalungAHNajafovAHoppeTBarralJM 2007 The UNC-45 chaperone mediates sarcomere assembly through myosin degradation in Caenorhabditis elegans. J Cell Biol 177 205 10
31. The International HapMap Consortium 2003 The International HapMap Project. Nature 426 789 796
32. GuoDCPapkeCLTran-FaduluVRegaladoESAvidanN 2009 Mutations in smooth muscle alpha-actin (ACTA2) cause coronary artery disease, stroke, and moyamoya disease, along with thoracic aortic disease. Am J Hum Genet 84 617 627
Štítky
Genetika Reprodukčná medicína
Článek Local Absence of Secondary Structure Permits Translation of mRNAs that Lack Ribosome-Binding SitesČlánek Independent Chromatin Binding of ARGONAUTE4 and SPT5L/KTF1 Mediates Transcriptional Gene SilencingČlánek Trade-Off between Bile Resistance and Nutritional Competence Drives Diversification in the Mouse GutČlánek FGF Signaling Regulates the Number of Posterior Taste Papillae by Controlling Progenitor Field SizeČlánek Mammalian BTBD12 (SLX4) Protects against Genomic Instability during Mammalian SpermatogenesisČlánek Identification of Nine Novel Loci Associated with White Blood Cell Subtypes in a Japanese PopulationČlánek Differential Effects of and Risk Variants on Association with Diabetic ESRD in African AmericansČlánek Dynamic Chromatin Localization of Sirt6 Shapes Stress- and Aging-Related Transcriptional Networks
Článok vyšiel v časopisePLOS Genetics
Najčítanejšie tento týždeň
2011 Číslo 6- Gynekologové a odborníci na reprodukční medicínu se sejdou na prvním virtuálním summitu
- Je „freeze-all“ pro všechny? Odborníci na fertilitu diskutovali na virtuálním summitu
-
Všetky články tohto čísla
- Local Absence of Secondary Structure Permits Translation of mRNAs that Lack Ribosome-Binding Sites
- Statistical Inference on the Mechanisms of Genome Evolution
- Revisiting Heterochromatin in Embryonic Stem Cells
- A Two-Stage Meta-Analysis Identifies Several New Loci for Parkinson's Disease
- Identification of a Sudden Cardiac Death Susceptibility Locus at 2q24.2 through Genome-Wide Association in European Ancestry Individuals
- Genomic Prevalence of Heterochromatic H3K9me2 and Transcription Do Not Discriminate Pluripotent from Terminally Differentiated Cells
- Epistasis between Beneficial Mutations and the Phenotype-to-Fitness Map for a ssDNA Virus
- Recurrent Chromosome 16p13.1 Duplications Are a Risk Factor for Aortic Dissections
- Telomere DNA Deficiency Is Associated with Development of Human Embryonic Aneuploidy
- Genome-Wide Association Study of White Blood Cell Count in 16,388 African Americans: the Continental Origins and Genetic Epidemiology Network (COGENT)
- Unexpected Role for DNA Polymerase I As a Source of Genetic Variability
- Transportin-SR Is Required for Proper Splicing of Genes and Plant Immunity
- How Chromatin Is Remodelled during DNA Repair of UV-Induced DNA Damage in
- Independent Chromatin Binding of ARGONAUTE4 and SPT5L/KTF1 Mediates Transcriptional Gene Silencing
- Two Evolutionary Histories in the Genome of Rice: the Roles of Domestication Genes
- Natural Allelic Variation Defines a Role for : Trichome Cell Fate Determination
- Multiple Common Susceptibility Variants near BMP Pathway Loci , , and Explain Part of the Missing Heritability of Colorectal Cancer
- Pathogenic Mechanism of the FIG4 Mutation Responsible for Charcot-Marie-Tooth Disease CMT4J
- A Functional Variant in Promoter Modulates Its Expression and Confers Disease Risk for Systemic Lupus Erythematosus
- Drift and Genome Complexity Revisited
- Chromosomal Macrodomains and Associated Proteins: Implications for DNA Organization and Replication in Gram Negative Bacteria
- Trade-Off between Bile Resistance and Nutritional Competence Drives Diversification in the Mouse Gut
- Pathways of Distinction Analysis: A New Technique for Multi–SNP Analysis of GWAS Data
- Web-Based Genome-Wide Association Study Identifies Two Novel Loci and a Substantial Genetic Component for Parkinson's Disease
- Chk2 and p53 Are Haploinsufficient with Dependent and Independent Functions to Eliminate Cells after Telomere Loss
- Exome Sequencing Identifies Mutations in High Myopia
- Distinct Functional Constraints Partition Sequence Conservation in a -Regulatory Element
- CorE from Is a Copper-Dependent RNA Polymerase Sigma Factor
- A Single Sex Pheromone Receptor Determines Chemical Response Specificity of Sexual Behavior in the Silkmoth
- FGF Signaling Regulates the Number of Posterior Taste Papillae by Controlling Progenitor Field Size
- Maps of Open Chromatin Guide the Functional Follow-Up of Genome-Wide Association Signals: Application to Hematological Traits
- Increased Susceptibility to Cortical Spreading Depression in the Mouse Model of Familial Hemiplegic Migraine Type 2
- Differential Gene Expression and Epiregulation of Alpha Zein Gene Copies in Maize Haplotypes
- Parallel Adaptive Divergence among Geographically Diverse Human Populations
- Genetic Analysis of Genome-Scale Recombination Rate Evolution in House Mice
- Mechanisms for the Evolution of a Derived Function in the Ancestral Glucocorticoid Receptor
- Mammalian BTBD12 (SLX4) Protects against Genomic Instability during Mammalian Spermatogenesis
- Interferon Regulatory Factor 8 Regulates Pathways for Antigen Presentation in Myeloid Cells and during Tuberculosis
- High-Resolution Analysis of Parent-of-Origin Allelic Expression in the Arabidopsis Endosperm
- Specific SKN-1/Nrf Stress Responses to Perturbations in Translation Elongation and Proteasome Activity
- Graded Nodal/Activin Signaling Titrates Conversion of Quantitative Phospho-Smad2 Levels into Qualitative Embryonic Stem Cell Fate Decisions
- Genome-Wide Analysis Reveals PADI4 Cooperates with Elk-1 to Activate Expression in Breast Cancer Cells
- Trait Variation in Yeast Is Defined by Population History
- Meiosis-Specific Loading of the Centromere-Specific Histone CENH3 in
- A Genome-Wide Survey of Imprinted Genes in Rice Seeds Reveals Imprinting Primarily Occurs in the Endosperm
- Multiple Regulatory Mechanisms to Inhibit Untimely Initiation of DNA Replication Are Important for Stable Genome Maintenance
- SIRT1 Promotes N-Myc Oncogenesis through a Positive Feedback Loop Involving the Effects of MKP3 and ERK on N-Myc Protein Stability
- Bacteriophage Crosstalk: Coordination of Prophage Induction by Trans-Acting Antirepressors
- Role of the Single-Stranded DNA–Binding Protein SsbB in Pneumococcal Transformation: Maintenance of a Reservoir for Genetic Plasticity
- Genomic Convergence among ERRα, PROX1, and BMAL1 in the Control of Metabolic Clock Outputs
- Genome-Wide Association of Bipolar Disorder Suggests an Enrichment of Replicable Associations in Regions near Genes
- Identification of Nine Novel Loci Associated with White Blood Cell Subtypes in a Japanese Population
- DNA Ligase III Promotes Alternative Nonhomologous End-Joining during Chromosomal Translocation Formation
- Differential Effects of and Risk Variants on Association with Diabetic ESRD in African Americans
- Finished Genome of the Fungal Wheat Pathogen Reveals Dispensome Structure, Chromosome Plasticity, and Stealth Pathogenesis
- Dynamic Chromatin Localization of Sirt6 Shapes Stress- and Aging-Related Transcriptional Networks
- Extracellular Matrix Dynamics in Hepatocarcinogenesis: a Comparative Proteomics Study of Transgenic and Null Mouse Models
- Integrating 5-Hydroxymethylcytosine into the Epigenomic Landscape of Human Embryonic Stem Cells
- Vive La Différence: An Interview with Catherine Dulac
- Multiple Loci Are Associated with White Blood Cell Phenotypes
- Nuclear Accumulation of Stress Response mRNAs Contributes to the Neurodegeneration Caused by Fragile X Premutation rCGG Repeats
- A New Mutation Affecting FRQ-Less Rhythms in the Circadian System of
- Cryptic Transcription Mediates Repression of Subtelomeric Metal Homeostasis Genes
- A New Isoform of the Histone Demethylase JMJD2A/KDM4A Is Required for Skeletal Muscle Differentiation
- Genetic Determinants of Lipid Traits in Diverse Populations from the Population Architecture using Genomics and Epidemiology (PAGE) Study
- A Genome-Wide RNAi Screen for Factors Involved in Neuronal Specification in
- PLOS Genetics
- Archív čísel
- Aktuálne číslo
- Informácie o časopise
Najčítanejšie v tomto čísle- Recurrent Chromosome 16p13.1 Duplications Are a Risk Factor for Aortic Dissections
- Statistical Inference on the Mechanisms of Genome Evolution
- Genome-Wide Association Study of White Blood Cell Count in 16,388 African Americans: the Continental Origins and Genetic Epidemiology Network (COGENT)
- Chromosomal Macrodomains and Associated Proteins: Implications for DNA Organization and Replication in Gram Negative Bacteria
Prihlásenie#ADS_BOTTOM_SCRIPTS#Zabudnuté hesloZadajte e-mailovú adresu, s ktorou ste vytvárali účet. Budú Vám na ňu zasielané informácie k nastaveniu nového hesla.
- Časopisy