Atomic Force Microscopy: A New Look at Pathogens

1. LidstromME, KonopkaMC (2010) The role of physiological heterogeneity in microbial population behavior. Nat Chem Biol 6: 705–712.

2. CamposM, Jacobs-WagnerC (2013) Cellular organization of the transfer of genetic information. Curr Opin Microbiol 16: 171–176.

3. DanielRA, ErringtonJ (2003) Control of cell morphogenesis in bacteria: two distinct ways to make a rod-shaped cell. Cell 113: 767–776.

4. GitaiZ (2009) New fluorescence microscopy methods for microbiology: sharper, faster, and quantitative. Curr Opin Microbiol 12: 341–346.

5. MilneJLS, SubramaniamS (2009) Cryo-electron tomography of bacteria: progress, challenges and future prospects. Nat Rev Microbiol 7: 666–675.

6. EngelA, MüllerDJ (2000) Observing single biomolecules at work with the atomic force microscope. Nat Struct Biol 7: 715–718.

7. DufrêneYF (2008) Towards nanomicrobiology using atomic force microscopy. Nat Rev Microbiol 6: 674–680.

8. DorobantuLS, GossGG, BurrellRE (2012) Atomic force microscopy: a nanoscopic view of microbial cell surfaces. Micron 43: 1312–1322.

9. FranciusG, LebeerS, AlsteensD, WildlingL, GruberHJ, et al. (2008) Detection, localization, and conformational analysis of single polysaccharide molecules on live bacteria. ACS Nano 2: 1921–1929.

10. AndreG, KulakauskasS, Chapot-ChartierMP, NavetB, DeghorainM, et al. (2010) Imaging the nanoscale organization of peptidoglycan in living Lactococcus lactis cells. Nat Commun 1: 27.

11. HayhurstEJ, KailasL, HobbsJK, FosterSJ (2008) Cell wall peptidoglycan architecture in Bacillus subtilis. Proc Natl Acad Sci USA 105: 14603–14608.

12. AndreG, DeghorainM, BronPA, van SwamII, KleerebezemM, et al. (2011) Fluorescence and atomic force microscopy imaging of wall teichoic acids in Lactobacillus plantarum. ACS Chem Biol 6: 366–376.

13. GillisA, DupresV, DelestraitG, MahillonJ, DufrêneYF (2012) Nanoscale imaging of Bacillus thuringiensis flagella using atomic force microscopy. Nanoscale 4: 1585–1591.

14. DagueE, DelcorteA, LatgéJP, DufrêneYF (2008) Combined use of atomic force microscopy, X-ray photoelectron spectroscopy, and secondary ion mass spectrometry for cell surface analysis. Langmuir 24: 2955–2959.

15. DupresV, AlsteensD, PauwelsK, DufrêneYF (2009) In vivo imaging of S-layer nanoarrays on Corynebacterium glutamicum. Langmuir 25: 9653–9655.

16. TouhamiA, JerichoM, BeveridgeTJ (2004) Atomic force microscopy of cell growth and division in Staphylococcus aureus. J Bacteriol 186: 3286–3295.

17. TurnerRD, ThomsonNH, KirkhamJ, DevineD (2010) Improvement of the pore trapping method to immobilize vital coccoid bacteria for high-resolution AFM: a study of Staphylococcus aureus. J Microsc 238: 102–110.

18. PlompM, LeightonTJ, WheelerKE, HillHD, MalkinAJ (2007) In vitro high-resolution structural dynamics of single germinating bacterial spores. Proc Natl Acad Sci USA 104: 9644–9649.

19. El-Kirat-ChatelS, DufrêneYF (2012) Nanoscale imaging of the Candida–macrophage interaction using correlated fluorescence-atomic force microscopy. ACS Nano 12: 10792–10799.

20. ShibataM, YamashitaH, UchihashiT, KandoriH, AndoT (2010) High-speed atomic force microscopy shows dynamic molecular processes in photoactivated bacteriorhodopsin. Nat Nanotechnol 5: 208–212.

21. YamashitaH, TaokaA, UchihashiT, AsanoT, AndoT, et al. (2012) Single-molecule imaging on living bacterial cell surface by high-speed AFM. J Mol Biol 422: 300–309.

22. FantnerGE, BarberoRJ, GrayDS, BelcherAM (2010) Kinetics of antimicrobial peptide activity measured on individual bacterial cells using high-speed atomic force microscopy. Nat Nanotechnol 5: 280–285.

23. LowerBH, YongsunthonR, ShiL, WildlingL, GruberHJ, et al. (2009) Antibody recognition force microscopy shows that outer membrane cytochromes OmcA and MtrC are expressed on the exterior surface of Shewanella oneidensis MR-1. Appl Environ Microbiol 75: 2931–2935.

24. DupresV, MenozziFD, LochtC, ClareBH, AbbottNL, et al. (2005) Nanoscale mapping and functional analysis of individual adhesins on living bacteria. Nat Meth 2: 515–520.

25. AlsteensD, GarciaMC, LipkePN, DufrêneYF (2010) Force-induced formation and propagation of adhesion nanodomains in living fungal cells. Proc Natl Acad Sci USA 107: 20744–20749.

26. VogelV, SheetzM (2006) Local force and geometry sensing regulate cell functions. Nature Rev. Mol Cell Biol 7: 265–275.

27. SokurenkoEV, VogelV, ThomasWE (2008) Catch-bond mechanism of force-enhanced adhesion: counterintuitive, elusive, but … widespread? Cell Host Microbe 4: 314–323.

28. YakovenkoO, SharmaS, ForeroM, TchesnokovaV, AprikianP, et al. (2008) FimH forms catch bonds that are enhanced by mechanical force due to allosteric regulation. J Biol Chem 283: 11596–11605.

29. AlsteensD, RamsookCB, LipkePN, DufrêneYF (2012) Unzipping a functional microbial amyloid. ACS Nano 6: 7703–7711.

30. MillerE, GarciaT, HultgrenS, OberhauserAF (2006) The mechanical properties of E. coli Type 1 pili measured by atomic force microscopy techniques. Biophys J 91: 3848–3856.

31. TouhamiA, JerichoMH, BoydJM, BeveridgeTJ (2006) Nanoscale characterization and determination of adhesion forces of Pseudomonas aeruginosa pili by using atomic force microscopy. J Bacteriol 188: 370–377.

32. LugmaierRA, SchedinS, KühnerF, BenoitM (2008) Dynamic restacking of Escherichia coli P-pili. Eur Biophys J 37: 111–120.

33. CastelainM, SjöströmAE, FällmanE, UhlinBE, AnderssonM (2010) Unfolding and refolding properties of S pili on extraintestinal pathogenic Escherichia coli. Eur Biophys J 39: 1105–1115.

34. TripathiP, BeaussartA, AlsteensD, DupresV, ClaesI, et al. (2013) Adhesion and nanomechanics of pili from the probiotic Lactobacillus rhamnosus GG. ACS Nano 7: 3685–3697.

35. MedalsyI, HensenU, MüllerDJ (2011) Imaging and quantifying chemical and physical properties of native proteins at molecular resolution by force-volume AFM. Ang Chem Int Edit 50: 12103–12108.

36. HeleniusJ, HeisenbergCP, GaubHE, MullerDJ (2008) Single-cell force spectroscopy. J Cell Sci 121: 1785–1791.